G295785


Basic Information

Item Value
gene id G295785
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73046614 ~ 73049200 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU335547
ATTCATTCATTGTCACATTAGTTTGTGTTATATTTGTAAGATGATTAGGAGTTCTACTTGGAAACAAGGTGATTCAATTGTTTATATATGGCACACATTCTTACAGATAAAAGTAAATCAAGTTACATTCAATGAAGGCAGTCATATGAGGTGCCCATATTGACTGCTTCCAACGTGACAAAAAACATAAACTCAACATTCAaccatttcaatgattttacagagttacagttcatagaaggaaatcagtcaattgaaatagatttattaggccctaatctttagatctcacatgactgggaatacagataatgcatctgttagtcacagatttcttaaaaaaaaagataggggcgtggatcagaaaaccagtctgtatctggtgtgacgACCATTTGCCTCATTCTGGGCGATCTCTCCTTCAGCGCGATCTCTccttagagttgatcaggctgttgattgtggcctgtggaatgttgtcccactcctcttcaatgggagtgtgaagtttctggatatttggtgggaacacactgtcatacacgtcattccagagcatcccaaacatgcttattaatgggtgacatgtctggtgagtatgcaggccatggaagaactgggagaCATGGGGCAGTGAtttatcatgttgaaacatggGGTGacggcggtggatgaatggcacaacagtcagcatgccaattgcacactccctcaaaacttaagacatctgtgacattgtgttgtgttaaaaaactgcacattttacagtgtaatgatcatgctattcaAACaacttattgatatgccacacctgtcaggtggatggataaccttggcaaaggagacatgctcactaacagggatgtaaacacattttttaacaaatttggagagaaataagctttttgtgcacatggaaaacttctgggatcttttattttagctctcgaaacatggtacaaacactttatatgttgcgtttatatttttgttcagtataatatcaAATCTAATATAACTAGCCTGATGTAGATTTAATTTAATCCAAGTGTTTTTAAGAGACACATTTgtacagagagaacaacagctaTGGCATGAAGTGAGAGGTGGATAACATGCTCAGTATGCATtgacaccagaggaggctggtgggaggagatgTGTGTATATGATATACGAGTGTCCTCTTGGGTATACCCATTTCAGTATGGATGTCCTCTCTGTTGTGGTCAACCCTGGAGAGGAGATGTGTGTATATGATATACGAGTGTCCTCTTGGGTATACCCATTTCAGTATGGATGTCCTCTCTGTTGTGGTCAACCCTGGAGAGGAGATGTGGAAcatgtagaaaacagtagaaataaagaaaaacccttgaatgagtcggtgtgtccaacgctttgactgctactgtacgTATGTTAATGCTTGgctagaacaaaagcctgcatcCATAACAGCTCACTCAATGTTCTCCAAAATTACCTCTGATTGCTCATTTGTGTCCCTCCTCCTTGTGACCTTGTGTCACGGCCGGTCCATCAAAGCAATTTCTATCAGGGGATCCATGTCAGTGTGCTGGAGCTCTGGCCGGTTCAAAGGTTGAAAAGGTTCCCCTTGCAGGGGATCAGCTGGGCTCTGGTGTAACCCAGGGATGGGCCTGTTTGGGGGGGAAATGATTAACGGTGGTCTGGTGATGACGGAGGCTGGGCGCCCTGACCTTTCCGTCCTGGCTGTATTTGCGGCATCGGTAAGCACCAGGCTTTAACAGCACCATGGATCCTGGTAGTGCCCAGACAGCTGCAGCGTTACCCCCCCGGCTGGGCTTATCGACTGGGCTGGTAGCCCAGGGATGAGGATACATGGGGGCCAGCGATGGGATGGGGGGGGTTGAGGGGGTGTAGAGTAGCATGGGGGAAAGGGGATGgtgtggggaggggagggaattAAGGGCTGGAACGAGGACGCATTGAGCTGGGCGAAGAGATGGGGTGGGGACGGGGAATTGAGGGGTTGGGAAGAGGGTCAAGGGCTGGGGCCAGGAATGGGGCTGGAGCCAAGCGCTGGGGCTAGGAGTGATATGAATTGTGTCAATATAATGTCAACATAAGCATCCTGGCATTGGCAGTGAATGAAATGAATGAAACATGACAGAACATCAATTAGTGAGTGTGGTAGTCGGGTTGACTTTAATTCCACACAGTGATTATCAGCATTACAGTCTAATTCACAGCTGAatctcagcacacacacacaccacgtaaCCTCTCCGATACGCtcccacagcacacacacaccacgttacctctccgatacgctccatcacacacaccacgtaACCTCTCCGAtacgctccatcacacacacacaccacgttacctcaccgatacgctccatcacacacaccacgttacctctctgatacgctccatcacacacaccacgttacctctccgatacgctccatcacacacaccacgttacctctctgatacgctccatcacacacacaccacgttacctctctgatacgctccatcacacacaccacgttacctctctgatacgctccatcacacacaccac

Function

NR:

description
PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU335547 True 2587 lncRNA 0.46 1 73046614 73049200

Neighbor

gene id symbol gene type direction distance location
fhl2a fhl2 coding downstream 7230 73025288 ~ 73039384 (-)
LOC110520539 mfsd9 coding downstream 165350 72870852 ~ 72881264 (-)
LOC110504714 LOC106586779 coding downstream 208161 72791304 ~ 72838453 (-)
LOC110504707 NA coding downstream 263740 72776716 ~ 72782874 (-)
LOC110520531 LOC106582025 coding downstream 504486 72490848 ~ 72542128 (-)
uxs1 uxs1 coding upstream 113316 73162516 ~ 73266610 (-)
st6gal2a st6gal2 coding upstream 288970 73338170 ~ 73505121 (-)
LOC110505436 LOC106581976 coding upstream 497999 73547199 ~ 73561315 (-)
grk1a grk1 coding upstream 542584 73591784 ~ 73597306 (-)
LOC110520555 LOC106586764 coding upstream 548242 73597442 ~ 73614530 (-)
G295738 NA non-coding downstream 72809 72948008 ~ 72973805 (-)
G295753 NA non-coding downstream 80844 72964648 ~ 72965770 (-)
G295750 NA non-coding downstream 83940 72962307 ~ 72962674 (-)
G294763 NA non-coding downstream 153343 72893018 ~ 72893271 (-)
G294762 NA non-coding downstream 154077 72892337 ~ 72892537 (-)
G295797 nck2 non-coding upstream 19548 73068748 ~ 73099306 (-)
G295823 NA non-coding upstream 71465 73120665 ~ 73123169 (-)
G295832 NA non-coding upstream 84274 73133474 ~ 73139783 (-)
G295865 NA non-coding upstream 167743 73216943 ~ 73217812 (-)
G295979 NA non-coding upstream 427654 73476854 ~ 73478556 (-)
G294697 NA other downstream 270007 72775407 ~ 72776607 (-)
G294451 NA other downstream 471182 72571249 ~ 72575432 (-)
LOC110504660 LOC106582021 other downstream 839816 72121974 ~ 72206818 (-)
G293984 NA other downstream 1142706 71903314 ~ 71903908 (-)
G296011 NA other upstream 523092 73572292 ~ 73572911 (-)
G296043 NA other upstream 582838 73632038 ~ 73633036 (-)
G296102 LOC106586753 other upstream 723954 73773154 ~ 73775299 (-)
G296100 LOC106586751 other upstream 759282 73808482 ~ 73809596 (-)
LOC110520572 cep97 other upstream 823773 73870489 ~ 73877576 (-)

Expression


Co-expression Network