G295865



Basic Information


Item Value
gene id G295865
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73216943 ~ 73217812 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU335652
atgttatcctacggctggtatgactgtagtgttctaattgatgttatcctacggctggtatgactgtagtgttctaattgatgttatcctacgactggtatgactgtagtgttctaattgatgttatcctacgactggtattactgtagtgttctaattgatgttatcctacgactggtatgactgtagtgttctaattgatgttatcctacggctggtatgactgtagtgttctaattgatgttatcctacgactggtatgactgtagtgttctaattgatgttatcctacggCTGGTATGACTAGTGTTCTAATTTATGTGTTATCCTACGGCTGGTatgactgtagtgttctaattgatgtgTTATCCTATGGCTGGTACTACTGCACAGAGGAGAATATATCAAACCTGTAACACCTCTGTCATTGTGCCTggatgtgacacacacacacacatacacatac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU335652 True 466 lncRNA 0.39 2 73216943 73217812

Neighbor


gene id symbol gene type direction distance location
fhl2a fhl2 coding downstream 177559 73025288 ~ 73039384 (-)
LOC110520539 mfsd9 coding downstream 335679 72870852 ~ 72881264 (-)
LOC110504714 LOC106586779 coding downstream 378490 72791304 ~ 72838453 (-)
LOC110504707 NA coding downstream 434069 72776716 ~ 72782874 (-)
LOC110520531 LOC106582025 coding downstream 674815 72490848 ~ 72542128 (-)
st6gal2a st6gal2 coding upstream 120358 73338170 ~ 73505121 (-)
LOC110505436 LOC106581976 coding upstream 329387 73547199 ~ 73561315 (-)
grk1a grk1 coding upstream 373972 73591784 ~ 73597306 (-)
LOC110520555 LOC106586764 coding upstream 379630 73597442 ~ 73614530 (-)
LOC110520557 LOC106586760 coding upstream 424708 73642520 ~ 73651632 (-)
G295832 NA non-coding downstream 77160 73133474 ~ 73139783 (-)
G295823 NA non-coding downstream 93774 73120665 ~ 73123169 (-)
G295797 nck2 non-coding downstream 117637 73068748 ~ 73099306 (-)
G295785 NA non-coding downstream 167743 73046614 ~ 73049200 (-)
G295753 NA non-coding downstream 251173 72964648 ~ 72965770 (-)
G295979 NA non-coding upstream 259042 73476854 ~ 73478556 (-)
G296010 NA non-coding upstream 353439 73571251 ~ 73571774 (-)
G296012 NA non-coding upstream 355838 73573650 ~ 73573923 (-)
G296039 NA non-coding upstream 410227 73628039 ~ 73628383 (-)
G296042 NA non-coding upstream 413847 73631659 ~ 73631961 (-)
G294697 NA other downstream 440336 72775407 ~ 72776607 (-)
G294451 NA other downstream 641511 72571249 ~ 72575432 (-)
LOC110504660 LOC106582021 other downstream 1010145 72121974 ~ 72206818 (-)
G293984 NA other downstream 1313035 71903314 ~ 71903908 (-)
G296011 NA other upstream 354480 73572292 ~ 73572911 (-)
G296043 NA other upstream 414226 73632038 ~ 73633036 (-)
G296102 LOC106586753 other upstream 555342 73773154 ~ 73775299 (-)
G296100 LOC106586751 other upstream 590670 73808482 ~ 73809596 (-)
LOC110520572 cep97 other upstream 655161 73870489 ~ 73877576 (-)

Expression



Co-expression Network