G296043


Basic Information

Item Value
gene id G296043
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73632038 ~ 73633036 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU335855
ATAGGGGGGGAGACACTGCGGTAGCTGGCTCGGAGGTATCAAATACAGGCCACTATTGAACGTTTATAGCGCTGCGGGAACCGTGTTTACTTTGCTTTGTTCCGGGTCAATGTGGACCGCGctgactttcaatgtagcaactGCTTGCTTGTGGAGGACTACAGGAGCGAAGTGGCTACTCGTAACAAGCAAGTAGCAAACATACACAAGCTACTGGGGAACACACGCCCGCCTAGTTTTTATCTTTCTTCCAACCCAGTTGCCGAACGCGGCACTAGTCTGGTGGAAGTTTCGCCGCCGTGTCGGCTCTATACAGCCAACTGGCCGGTGCTCTGCAGGGTTCCATCCCCGAAGGGGTCTCCCCCTTCCCTGGAGAACGGAGATGTTCTCgacccaaccaaccaaccatggATGTACGTCACTCGCAGTGGAAATCGAAGAAAGCATCCTCTGCCAACGGAGGTCTCCATGGAGATGTTGAACCCGGATCTGACAAAGACCAGAAACAGCTTTGCCGTTCCGGCGCCTTCTTCCTTGGGGGCTTCCCATTCAAGATCGGATCCGGAGGTACCTGCGTCTTTGTGCTCGGTTCTCCCTCTCCGGTGGCATCTACCTCGGGTTCAGATCCTCGGATCTCCCACCCTCATCAGACCGTGAAGCTGCTTGAGAGACCGGTGTCGTGCCTAAAATCTCCCCCCTGCCAGAATTCCCCCTTCGTTTGAACGCACACACACTAaattcttcattgctgcgacttgcttgctagttgagatttctgctcTTCACTCCGTTGTCAGTTTAGCCACTGATCTTAGAAGCAGAAAGCAATTTTTATTTGTGTCCTTCAAGGCAGCTGTCAATGATCACGTTAGGCTGCgtttcatttgttttttttatggccGTTTGATCACGGGGTAGGCACTATTAATGTCTGCAGTTTTCcgtttggctatttgtttcaagtgtattagtctataaataaatctATTTGCCAACATT
>TU335849
ATAGGGGGGGAGACACTGCGGTAGCTGGCTCGGAGGTATCAAATACAGGCCACTATTGAACGTTTATAGCGCTGCGGGAACCGTGTTTACTTTGCTTTGTTCCGGGTCAATGTGGACCGCGctgactttcaatgtagcaactGCTTGCTTGTGGAGGACTACAGGAGCGAAGTGGCTACTCGTAACAAGCAAGTAGCAAACATACACAAGCTACTGGGGAACACACGCCCGCCTAGTTTTTATCTTTCTTCCAACCCAGTTGCCGAACGCGGCACTAGTCTGGTGGAAGTTTCGCCGCCGTGTCGGCTCTATACAGCCAACTGGCCGGTGCTCTGCAGGGTTCCATCCCCGAAGGGGTCTCCCCCTTCCCTGGAGAACGGAGATGTTCTCgacccaaccaaccaaccatggATGTACGTCACTCGCAGTGGAAATCGAAGAAAGCATCCTCTGCCAACGGAGGTCTCCATGGAGATGTTGAACCCGGATCTGACAAAGACCAGAAACAGCTTTGCCGTTCCGGCGCCTTCTTCCTTGGGGGCTTCCCATTCAAGATCGGATCCGGAGGTACCTGCGTCTTTGTGCTCGGTTCTCCCTCTCCGGTGGCATCTACCTCGGGTTCAGATCCTCGGATCTCCCACCCTCATCAGACCGTGAAGCTGCTTGAGAGACCGGTGTCGTGCCTAAAATCTCCCCCCTGCCAGAATTCCCCCTTCGTTTGAACGCACACACA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106591102

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU335855 False 999 TUCP 0.51 1 73632038 73633036
TU335849 True 733 TUCP 0.55 1 73632304 73633036

Neighbor

gene id symbol gene type direction distance location
LOC110520555 LOC106586764 coding downstream 17508 73597442 ~ 73614530 (-)
grk1a grk1 coding downstream 34732 73591784 ~ 73597306 (-)
LOC110505436 LOC106581976 coding downstream 70723 73547199 ~ 73561315 (-)
st6gal2a st6gal2 coding downstream 126917 73338170 ~ 73505121 (-)
uxs1 uxs1 coding downstream 365428 73162516 ~ 73266610 (-)
LOC110520557 LOC106586760 coding upstream 9484 73642520 ~ 73651632 (-)
LOC110520558 LOC106586756 coding upstream 28960 73661996 ~ 73697362 (-)
zgc:92313 LOC106586754 coding upstream 106635 73739671 ~ 73759734 (-)
LOC110520571 LOC106586749 coding upstream 219048 73852084 ~ 73868375 (-)
LOC110520572 cep97 coding upstream 237453 73870489 ~ 73877576 (-)
G296042 NA non-coding downstream 77 73631659 ~ 73631961 (-)
G296039 NA non-coding downstream 3655 73628039 ~ 73628383 (-)
G296012 NA non-coding downstream 58115 73573650 ~ 73573923 (-)
G296010 NA non-coding downstream 60264 73571251 ~ 73571774 (-)
G295979 NA non-coding downstream 153482 73476854 ~ 73478556 (-)
G296052 NA non-coding upstream 26472 73659508 ~ 73660094 (-)
G296055 NA non-coding upstream 54622 73687658 ~ 73688154 (-)
G296057 NA non-coding upstream 64677 73697713 ~ 73699561 (-)
G296068 NA non-coding upstream 83269 73716305 ~ 73716793 (-)
G296011 NA other downstream 59127 73572292 ~ 73572911 (-)
LOC110520539 mfsd9 other downstream 751184 72870852 ~ 72881264 (-)
G294697 NA other downstream 855431 72775407 ~ 72776607 (-)
G294451 NA other downstream 1056606 72571249 ~ 72575432 (-)
LOC110504660 LOC106582021 other downstream 1425240 72121974 ~ 72206818 (-)
G296102 LOC106586753 other upstream 140118 73773154 ~ 73775299 (-)
G296100 LOC106586751 other upstream 175446 73808482 ~ 73809596 (-)
G296166 LOC106581959 other upstream 244683 73877719 ~ 73880371 (-)
LOC110520576 NA other upstream 337446 73960416 ~ 73973401 (-)

Expression


Co-expression Network