G296117


Basic Information

Item Value
gene id G296117
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73811954 ~ 73813130 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU335957
tttaagcttttatttctttcatcacattcccagtgggtgagaagtttacatacactcaattagtatttggtagaattgcctttaaattgtttaacttgggtcaaacgttttgggtagccttccacaagcatcccacaataagttgggtgaattttggcccattcctcctgacagagctggtgtaacggagtcaggtttgtaggcctccttgcacgcacacgctttttcagttctgcccacaaatgttctataggattgaggttggGGCTTTGTGActgcaactccaataccttgactttgttgtccttaagccattttgccacaactttggaagtatgcttggggtcattgtccatttggcatccccctttttcctccaaacataacgatggtcattatggccaaagagttatatttttgtttcaccagaccagaggacataactccaaaaagtacgatctttgtccccatatgcagttacAATCTGTATGgcagttttggaacagtggcttcttccttgctgagcggcctttcagtttatgtcgatataggactcgatatcggacttgtttaactgtgaatagagatacttttgtaccggtttcctccagcatcttcacaaggtcctttgctgttgttctgggattgatttgcattttcgcaccaaagtacgttcatctctaggagacagaacacatctccttcctgagcggtatgactgctgtgtggtcccatggtgtttatacttgcgtactattgtttgtaaagatgaacatggtaccttcaggcatttggaaatagcttgcaaggatgaatcagacttgtggaggtctacaatttggctgatttcttttgattttcccaagatgtcaagaaaagaggcgctgagtttgaaggtaggccttgaaatacatccacaagtacacctccaattgactcaaatgatgtcaattagcctatcagaactttactttttac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU335957 True 978 lncRNA 0.42 2 73811954 73813130

Neighbor

gene id symbol gene type direction distance location
zgc:92313 LOC106586754 coding downstream 52220 73739671 ~ 73759734 (-)
LOC110520558 LOC106586756 coding downstream 114592 73661996 ~ 73697362 (-)
LOC110520557 LOC106586760 coding downstream 160322 73642520 ~ 73651632 (-)
LOC110520555 LOC106586764 coding downstream 197424 73597442 ~ 73614530 (-)
grk1a grk1 coding downstream 214648 73591784 ~ 73597306 (-)
LOC110520571 LOC106586749 coding upstream 38954 73852084 ~ 73868375 (-)
LOC110520572 cep97 coding upstream 57359 73870489 ~ 73877576 (-)
LOC110520575 LOC106586746 coding upstream 70411 73883541 ~ 73889222 (-)
LOC110520576 NA coding upstream 147286 73960416 ~ 73973401 (-)
LOC118964355 NA coding upstream 160322 73973452 ~ 73973615 (-)
G296101 NA non-coding downstream 1518 73770621 ~ 73810436 (-)
G296072 NA non-coding downstream 90445 73721161 ~ 73721509 (-)
G296071 NA non-coding downstream 91601 73720108 ~ 73720353 (-)
G296069 NA non-coding downstream 94493 73717172 ~ 73717461 (-)
G296068 NA non-coding downstream 95161 73716305 ~ 73716793 (-)
G296120 LOC106586750 non-coding upstream 4392 73817522 ~ 73818469 (-)
G296129 NA non-coding upstream 11062 73824192 ~ 73824664 (-)
G296141 NA non-coding upstream 32157 73845287 ~ 73845978 (-)
G296164 NA non-coding upstream 59095 73872225 ~ 73872570 (-)
G296100 LOC106586751 other downstream 2358 73808482 ~ 73809596 (-)
G296102 LOC106586753 other downstream 36655 73773154 ~ 73775299 (-)
G296043 NA other downstream 178918 73632038 ~ 73633036 (-)
G296011 NA other downstream 239043 73572292 ~ 73572911 (-)
LOC110520539 mfsd9 other downstream 931100 72870852 ~ 72881264 (-)
G296166 LOC106581959 other upstream 64589 73877719 ~ 73880371 (-)
G296315 NA other upstream 426057 74239187 ~ 74239795 (-)
G298065 NA other upstream 2147417 75960547 ~ 75963074 (-)

Expression


Co-expression Network