G296193


Basic Information

Item Value
gene id G296193
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73928861 ~ 73929759 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU336050
CTCTAAGCTGCGTGGATGAGTAGGAGCGCAGCTCCCCCATGACCGCcacgcagaagaaatatcagctgGCGCAGAGAAcgtaacagggaaaactctagaaagttgagtgaacaCTATCAACATTttcctttactgtgggaattgtgatcgaatcaatgcaatattagtaattttcaatgcaacataccgaaacaaaactaactatgcaagacttagtatgcaagagattttgttgtatgCAGAACGAATCGGAGAATGATTCTATTACATTGACACGCACGATTCAGCCAGTACTctacacaaaccggtgcgccatagccaatcagagctgcagtaggccaaaatgcaaatagaccattgccatatatggatctgtgccattcactttgatctggactgtgtttacagcatgagcggttgTGAGttgatgcgcttgttttgagatcaaagcgagagctgcatgtagccacttGTGCACATTTGtacatatcctttgctagttagtgagttattagcccagttatagatcatttgtagtcagcaatggggtAGTGACTGTAACCTGTAGGGGGGGCCATCTTGGTGGCAGCAGCAACAGCCCCCTGTGATTGGCTCTCAGTGCCTGCAGTGGAGGAAGAGGATTGACTCTGTCCTGGGGGGTCGGCCAACAGGAGCAGCCGCTGCAAGCGCCTACACACTAAACTTACTGGCAGCCGATGAGGGCCGTACTCTGACAGAGGTAGATagacgagagggacagagagagagagagagagagaggtggagagacgagagggacagaggtggagagacgagagggacagagggacgagagggacagagggatgagagg

Function

NR:

description
PREDICTED: DDB1- and CUL4-associated factor 6-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU336050 True 853 lncRNA 0.49 2 73928861 73929759

Neighbor

gene id symbol gene type direction distance location
LOC110520575 LOC106586746 coding downstream 39639 73883541 ~ 73889222 (-)
LOC110520572 cep97 coding downstream 51285 73870489 ~ 73877576 (-)
LOC110520571 LOC106586749 coding downstream 60486 73852084 ~ 73868375 (-)
zgc:92313 LOC106586754 coding downstream 169127 73739671 ~ 73759734 (-)
LOC110520558 LOC106586756 coding downstream 231499 73661996 ~ 73697362 (-)
LOC110520576 NA coding upstream 30657 73960416 ~ 73973401 (-)
LOC118964355 NA coding upstream 43693 73973452 ~ 73973615 (-)
LOC118964353 NA coding upstream 44571 73974330 ~ 73974439 (-)
LOC118964361 NA coding upstream 47621 73977380 ~ 73977551 (-)
LOC110520577 LOC106586797 coding upstream 56142 73985901 ~ 74028822 (-)
G296165 NA non-coding downstream 55905 73872734 ~ 73872956 (-)
G296164 NA non-coding downstream 56291 73872225 ~ 73872570 (-)
G296141 NA non-coding downstream 82883 73845287 ~ 73845978 (-)
G296129 NA non-coding downstream 104197 73824192 ~ 73824664 (-)
G296144 NA non-coding upstream 18312 73948071 ~ 73949708 (-)
G296145 NA non-coding upstream 20166 73949925 ~ 73950171 (-)
G296152 NA non-coding upstream 20748 73950507 ~ 73952102 (-)
G296148 NA non-coding upstream 25145 73954904 ~ 73956047 (-)
G296151 NA non-coding upstream 28211 73957970 ~ 73958987 (-)
G296166 LOC106581959 other downstream 48490 73877719 ~ 73880371 (-)
G296100 LOC106586751 other downstream 119265 73808482 ~ 73809596 (-)
G296102 LOC106586753 other downstream 153562 73773154 ~ 73775299 (-)
G296043 NA other downstream 295825 73632038 ~ 73633036 (-)
G296315 NA other upstream 309428 74239187 ~ 74239795 (-)
G298065 NA other upstream 2030788 75960547 ~ 75963074 (-)
G298131 NA other upstream 2125362 76055121 ~ 76057006 (-)
G298192 NA other upstream 2236244 76166003 ~ 76166401 (-)

Expression


Co-expression Network