G296152


Basic Information

Item Value
gene id G296152
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 73950507 ~ 73952102 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU335998
aacagggcagcacagctggcccttggatgtacacagagagctaacattaatcatatgcatgtcaatctctcctggctcaaagtgaaggagagagacttcATCACTAcctgtatttatgagaggtattgacatgttgaatgcgccaagctgtctgtttgaacaaCCGGAGCACAGCTAGAACAcctatgcataccccacaagacatgccaccagaggtctcttcacagtccccaagtccagaacacactatgggaggcgcacagtacaacattagagccataactacatggaactctattccacattaagtatctgatgcaagcagtaaaattaaaTTTAGAAACaatataaaaatacaccttatggaacagcggggactgtgaagcaacacaaacatagacggacacacacaataacatacgcactatacacacacatcttttgtattgtagatatgaggtagtggtggtgtatgggcctgagggcacacaatgtgttgtgaaatctgtgaatgtattatatatattttttaaatggtataaactgccttaattttgctagaccccaggaagagtagctgctgccttggcaacagatAATAGGTAATaaacacaaataaaaaaatacatgtggGCTCTCTACATCCCTGTAGAGGTACACCTAGCCTGATCCAAAAAATCTGAATGTGCTGCTTTAGTTAACTTCTCTGTGTGCTTTCAAGCACATACTGATCAGAGAACAGGCTATGGTTACCGTCCCATATTCAAACCCTGTGGTTATCACATAGCGAACACGTTACACATTCTTAATCACTTTATTAGAGCACCAGTTCTCACCCTGAGAGAATAACTGTGGATCCTGTTAGCTAATGTGGGTGTGTATTAGTATGGTTTACCTCCAGAGTTATTTatatctgtgtttgtctgtgtcacTGTCCAAGTATGGTACTACATTGTAAGAGCAAAGCAATACTCCAGAATTTGAGGTATTGTCAACTTTTAATTTCCACAGACTTTTTTCTACTGTTGTATTAAAGTTTTTTTGTTATA
>TU335999
ctacaggtcctagtttctaccttcttaacagcactatcaacaaggcaggtcctacaggccctagtttctaccttcttaacagcactatcaacaaggcaggtcctacaggccctagtttctactttcttaacaacactatcaacaaggcaggtcctacaggccctagtttctactttcttaacaacactatcaacaaggcaggtcctacaggccctagtttctaccttcttaacaacactatcaacaaggcaggtcctacaggccctagtttctaccttcttaacagcactatcaacaaggcaggtcctacaggccctagtttctactttcttaacaacactatcaacaaggcaggtcctacaggccctagtttctaccttaacaacactatcaacaaggcaggccctacaggccctagtttctaccttcttaacaacactatcaacaaggcaggtcctacaggccctagttttgtcgcacctggactactgttgtcgtgtggtcaggtgccacaaaaagggacttaggaaacttgcaattggctcagaacagggcagcacagctggcccttggatgtacacagagagctaacattaatcatatgcatgtcaatctctcctggctcaaagtgaaggagagagacttcATCACTAcctgtatttatgagaggtattgacatgttgaatgcgccaagctgtctgtttgaacaaCCGGAGCACAGCTAGAACAcctatgcataccccacaagacatgccaccagaggtctcttcacagtccccaagtccagaacacactatgggaggcgcacagtacaacattagagccataactacatggaactctattccacattaagtatctgatgcaagcagtaaaattaaaTTTAGAAACaatataaaaatacaccttatggaacagcggggactgtgaagcaacacaaacatagacggacacacacaataacatacgcactatacacacacatcttttgtattgtagatatgaggtagtggtggtgtatgggcctgagggcacacaatgtgttgtgaaatctgtgaatgtattatatatattttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU335998 False 1049 lncRNA 0.40 1 73950507 73951555
TU335999 True 1077 lncRNA 0.44 1 73951026 73952102

Neighbor

gene id symbol gene type direction distance location
LOC110520575 LOC106586746 coding downstream 61285 73883541 ~ 73889222 (-)
LOC110520572 cep97 coding downstream 72931 73870489 ~ 73877576 (-)
LOC110520571 LOC106586749 coding downstream 82132 73852084 ~ 73868375 (-)
zgc:92313 LOC106586754 coding downstream 190773 73739671 ~ 73759734 (-)
LOC110520558 LOC106586756 coding downstream 253145 73661996 ~ 73697362 (-)
LOC110520576 NA coding upstream 8314 73960416 ~ 73973401 (-)
LOC118964355 NA coding upstream 21350 73973452 ~ 73973615 (-)
LOC118964353 NA coding upstream 22228 73974330 ~ 73974439 (-)
LOC118964361 NA coding upstream 25278 73977380 ~ 73977551 (-)
LOC110520577 LOC106586797 coding upstream 33799 73985901 ~ 74028822 (-)
G296145 NA non-coding downstream 336 73949925 ~ 73950171 (-)
G296144 NA non-coding downstream 799 73948071 ~ 73949708 (-)
G296193 NA non-coding downstream 20748 73928861 ~ 73929759 (-)
G296165 NA non-coding downstream 77551 73872734 ~ 73872956 (-)
G296164 NA non-coding downstream 77937 73872225 ~ 73872570 (-)
G296148 NA non-coding upstream 2802 73954904 ~ 73956047 (-)
G296151 NA non-coding upstream 5868 73957970 ~ 73958987 (-)
G296203 NA non-coding upstream 25509 73977611 ~ 73977948 (-)
G296206 NA non-coding upstream 31000 73983102 ~ 73983378 (-)
G296166 LOC106581959 other downstream 70136 73877719 ~ 73880371 (-)
G296100 LOC106586751 other downstream 140911 73808482 ~ 73809596 (-)
G296102 LOC106586753 other downstream 175208 73773154 ~ 73775299 (-)
G296043 NA other downstream 317471 73632038 ~ 73633036 (-)
G296315 NA other upstream 287085 74239187 ~ 74239795 (-)
G298065 NA other upstream 2008445 75960547 ~ 75963074 (-)
G298131 NA other upstream 2103019 76055121 ~ 76057006 (-)
G298192 NA other upstream 2213901 76166003 ~ 76166401 (-)

Expression


Co-expression Network