Gene
RNA
| Item | Value |
|---|---|
| gene id | G295437 |
| gene name | LOC107575789 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 74324630 ~ 74325001 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU335166 | True | 372 | lncRNA | 0.51 | 1 | 74324630 | 74325001 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520580 | LOC106586789 | coding | upstream | 25051 | 74282141 ~ 74299579 (+) |
| LOC110520581 | NA | coding | upstream | 49639 | 74272450 ~ 74274991 (+) |
| nyx | nyx | coding | upstream | 162690 | 74149425 ~ 74161940 (+) |
| LOC110520578 | LOC106586794 | coding | upstream | 178880 | 74118329 ~ 74145750 (+) |
| LOC110520586 | NA | coding | downstream | 346282 | 74671283 ~ 74675668 (+) |
| LOC110504760 | LOC106586785 | coding | downstream | 358001 | 74683002 ~ 74778935 (+) |
| LOC110520589 | ccdc80 | coding | downstream | 768571 | 75093572 ~ 75130797 (+) |
| LOC110504766 | NA | coding | downstream | 823428 | 75148429 ~ 75151967 (+) |
| LOC110504776 | LOC106586832 | coding | downstream | 827687 | 75152688 ~ 75163981 (+) |
| G295434 | NA | non-coding | upstream | 3565 | 74320479 ~ 74321065 (+) |
| G295431 | NA | non-coding | upstream | 8759 | 74315567 ~ 74315871 (+) |
| G295423 | NA | non-coding | upstream | 19189 | 74305180 ~ 74305441 (+) |
| G295422 | NA | non-coding | upstream | 19635 | 74304609 ~ 74304995 (+) |
| G295388 | NA | non-coding | upstream | 69429 | 74254383 ~ 74255201 (+) |
| G295440 | NA | non-coding | downstream | 2789 | 74327790 ~ 74328021 (+) |
| G295442 | NA | non-coding | downstream | 5533 | 74330534 ~ 74330795 (+) |
| G295443 | NA | non-coding | downstream | 5824 | 74330825 ~ 74331605 (+) |
| G295448 | NA | non-coding | downstream | 16792 | 74341793 ~ 74342147 (+) |
| G295453 | NA | non-coding | downstream | 27103 | 74352104 ~ 74352353 (+) |
| G295421 | NA | other | upstream | 22026 | 74302102 ~ 74302604 (+) |
| G295359 | NA | other | upstream | 145288 | 74178443 ~ 74179342 (+) |
| G295230 | NA | other | upstream | 366841 | 73953246 ~ 73957789 (+) |
| ecrg4a | cssa25h2orf40 | other | upstream | 1162227 | 73148293 ~ 73162405 (+) |
| LOC110520546 | LOC106586770 | other | upstream | 1184005 | 73133510 ~ 73140625 (+) |
| G295541 | NA | other | downstream | 168303 | 74493304 ~ 74496718 (+) |
| G295558 | NA | other | downstream | 189142 | 74514143 ~ 74533086 (+) |
| G296694 | NA | other | downstream | 544953 | 74869954 ~ 74872909 (+) |
| G296868 | NA | other | downstream | 668559 | 74993560 ~ 75036631 (+) |
| G297034 | NA | other | downstream | 832311 | 75157312 ~ 75159134 (+) |
