G296622


Basic Information

Item Value
gene id G296622
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 74757136 ~ 74761777 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU336529
atagtagtatgataggtgttgttttatagggtcagtcatagtagtatgataggtacaGTGTAATGtgctgttttacagggtcagtcatagtagtatgataggtgttgttttacagggtcagccatagtagtatgataggtgttgttttacagggtcagccatagtagtatgataggtgttgttttacagggtcagtcatactagtatgataggtgttgttttacagggtcagtcatagtagtatgataggtgttgttttacagggtcagtcatagtagtatgataggtacaGTGTAATGtgctgttttacagggtcagtcatagtagtatgataggtgttgttttacagggtcagccatagtagtatgataggtgttgttttacagggtcagccatagtagtatggcgTCCCtagagcaaattagggttaagtgccttgctcaagtgcacGTTGACAGGTTTTTCACCTTTTCGgctcaggtattcaaaccagcgacctttcggttactggcccaatgctcaaaTACCTGGGGTATCATGGGACTTAATTTGAGTCAGTGGATTTGAGTATTTCTaaatacattccaatattc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU336529 True 593 lncRNA 0.40 3 74757136 74761777

Neighbor

gene id symbol gene type direction distance location
LOC110520587 LOC106586791 coding downstream 76353 74677651 ~ 74680783 (-)
LOC110520585 LOC106586792 coding downstream 111922 74586659 ~ 74645214 (-)
LOC100136729 mao coding downstream 194265 74496189 ~ 74562871 (-)
LOC110520583 LOC106586790 coding downstream 281913 74473958 ~ 74475223 (-)
LOC110504742 LOC106586786 coding downstream 318449 74165518 ~ 74438687 (-)
LOC118964358 NA coding upstream 115771 74877548 ~ 74877702 (-)
LOC118964328 NA coding upstream 129944 74891721 ~ 74892320 (-)
LOC118964329 NA coding upstream 153442 74867279 ~ 74929805 (-)
LOC110520594 LOC106586829 coding upstream 773237 75535014 ~ 75579525 (-)
LOC110520593 LOC106586828 coding upstream 820255 75582032 ~ 75628909 (-)
G296521 NA non-coding downstream 91890 74664929 ~ 74665246 (-)
G296553 NA non-coding downstream 109147 74647692 ~ 74647989 (-)
G296532 NA non-coding downstream 143925 74608492 ~ 74613211 (-)
G296494 NA non-coding downstream 231296 74523065 ~ 74525840 (-)
G296625 NA non-coding upstream 1474 74763251 ~ 74764088 (-)
G296646 NA non-coding upstream 25802 74787579 ~ 74787789 (-)
G296650 NA non-coding upstream 26880 74788657 ~ 74788872 (-)
G296760 NA non-coding upstream 39008 74800785 ~ 74887034 (-)
G296764 NA non-coding upstream 60719 74822496 ~ 74840471 (-)
G296315 NA other downstream 517341 74239187 ~ 74239795 (-)
LOC110520576 NA other downstream 785306 73960416 ~ 73973401 (-)
G296166 LOC106581959 other downstream 876765 73877719 ~ 73880371 (-)
LOC110520572 cep97 other downstream 883319 73870489 ~ 73877576 (-)
G296100 LOC106586751 other downstream 947540 73808482 ~ 73809596 (-)
G298065 NA other upstream 1198770 75960547 ~ 75963074 (-)
G298131 NA other upstream 1293344 76055121 ~ 76057006 (-)
G298192 NA other upstream 1404226 76166003 ~ 76166401 (-)
G299024 NA other upstream 2021066 76782843 ~ 76787731 (-)
pknox1.1 pknox1 other upstream 3074705 77832447 ~ 77844072 (-)

Expression


Co-expression Network