G296764


Basic Information

Item Value
gene id G296764
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 74822496 ~ 74840471 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU336707
tatatagggagtaccattaccaagtcgatgtgcaggggaacgaggtaataacatggttttatatagggagtaccgttaccaagtcgatgtgcaggggaacgaggtaataacatgatgatatatagggagtaccgttaccaagtcgatgtgcaggggaacgaggtaataacatggtgatatatagggagtaccgttaccaagtcgatgtgcaggggaacgaggtaataacatggtgatatatagggagcaccgttaccaagtcgatgtgcaggggaacgaggtaataacatggttttatatagggagtaccgttaccaattcgatgtgcaggggaacgagg
>TU336712
agggagtaccgttaccaagtcgatgtgcaggggaacgaggtaataacatggttttatatagggagtaccgttaccaagtcgatgtgcaggggaacgaggtaataacatggtgatatatagggagtaccgttaccaagtcgatgtgtaggggaacgaggtaataacatggtgatatatagggagtaccgttaccaagtcgatatgtaggggaacgaggtaataacatggtgatatatagggagtaccgttaccaagtcgatgtgcaggggaacgaggtaataacatggttttatatagggagtaccgttaccaagtcgatgtgcaggggaacgaggtaataacatggttttatatagggagtaccgttaccaagtcgatgtgcaggggaacgaggtaataacatggtgatatatagggagtaccgttaccaagttgATAtgtaggggaacgaggtaataacatggttttatatagggagtaccattaccaagtcga
>TU336704
agggagtaccgttaccaagtcgatgtgcaggggaacgaggtaataacatggttttatatagggagtaccgttaccaagtcgatgtgcaggggaacgaggtaataacatggtgatatatagggagtaccgttaccaagtcgatgtgtaggggaacgaggtaataacatggtgatatatagggagtaccgttaccaagtcgatgtgcaggggaacgaggtaataacatggtgatatatagggagtaccgttaccaagtcgatatgtaggggaacgaggtaataacatggttttatatagggagtaccgttaccaagtcgatgtgcaggggaacgaggtaataacatggtgatatatagggagtaccgttaccaagtcgatgtgcaggggaacgaggtaataacatggttttatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU336707 False 340 lncRNA 0.45 3 74822496 74839886
TU336712 False 495 lncRNA 0.44 3 74823280 74840471
TU336704 True 413 lncRNA 0.44 2 74837994 74840471

Neighbor

gene id symbol gene type direction distance location
LOC110520587 LOC106586791 coding downstream 141713 74677651 ~ 74680783 (-)
LOC110520585 LOC106586792 coding downstream 177282 74586659 ~ 74645214 (-)
LOC100136729 mao coding downstream 259625 74496189 ~ 74562871 (-)
LOC110520583 LOC106586790 coding downstream 347273 74473958 ~ 74475223 (-)
LOC110504742 LOC106586786 coding downstream 383809 74165518 ~ 74438687 (-)
LOC118964358 NA coding upstream 37077 74877548 ~ 74877702 (-)
LOC118964328 NA coding upstream 51250 74891721 ~ 74892320 (-)
LOC118964329 NA coding upstream 74748 74867279 ~ 74929805 (-)
LOC110520594 LOC106586829 coding upstream 694543 75535014 ~ 75579525 (-)
LOC110520593 LOC106586828 coding upstream 741561 75582032 ~ 75628909 (-)
G296650 NA non-coding downstream 33624 74788657 ~ 74788872 (-)
G296646 NA non-coding downstream 34707 74787579 ~ 74787789 (-)
G296625 NA non-coding downstream 58408 74763251 ~ 74764088 (-)
G296622 NA non-coding downstream 60719 74757136 ~ 74761777 (-)
G296769 NA non-coding upstream 4288 74844759 ~ 74848704 (-)
G296770 NA non-coding upstream 5657 74846128 ~ 74850671 (-)
G296780 NA non-coding upstream 25677 74866148 ~ 74866661 (-)
G296798 NA non-coding upstream 62751 74903222 ~ 74903752 (-)
G296315 NA other downstream 582701 74239187 ~ 74239795 (-)
LOC110520576 NA other downstream 850666 73960416 ~ 73973401 (-)
G296166 LOC106581959 other downstream 942125 73877719 ~ 73880371 (-)
LOC110520572 cep97 other downstream 948679 73870489 ~ 73877576 (-)
G296100 LOC106586751 other downstream 1012900 73808482 ~ 73809596 (-)
G298065 NA other upstream 1120076 75960547 ~ 75963074 (-)
G298131 NA other upstream 1214650 76055121 ~ 76057006 (-)
G298192 NA other upstream 1325532 76166003 ~ 76166401 (-)
G299024 NA other upstream 1942372 76782843 ~ 76787731 (-)
pknox1.1 pknox1 other upstream 2996011 77832447 ~ 77844072 (-)

Expression


Co-expression Network