G296913



Basic Information


Item Value
gene id G296913
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 74992391 ~ 75045399 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU336888
gggtatgtctctatcagttttgcacatcgagagactgaatttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacacatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagc

Function


NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU336888 True 440 lncRNA 0.44 4 74992391 75045399

Neighbor


gene id symbol gene type direction distance location
LOC118964329 NA coding downstream 62586 74867279 ~ 74929805 (-)
LOC118964328 NA coding downstream 100071 74891721 ~ 74892320 (-)
LOC118964358 NA coding downstream 114689 74877548 ~ 74877702 (-)
LOC110520587 LOC106586791 coding downstream 311608 74677651 ~ 74680783 (-)
LOC110520585 LOC106586792 coding downstream 347177 74586659 ~ 74645214 (-)
LOC110520594 LOC106586829 coding upstream 489615 75535014 ~ 75579525 (-)
LOC110520593 LOC106586828 coding upstream 536633 75582032 ~ 75628909 (-)
LOC110520599 LOC106586824 coding upstream 809334 75854733 ~ 75919692 (-)
trnaa-ugc-5 NA coding upstream 844966 75890365 ~ 75890437 (-)
LOC110520602 LOC100136552 coding upstream 1057438 76102837 ~ 76118153 (-)
G296798 NA non-coding downstream 88639 74903222 ~ 74903752 (-)
G296760 NA non-coding downstream 105357 74800785 ~ 74887034 (-)
G296780 NA non-coding downstream 125730 74866148 ~ 74866661 (-)
G296770 NA non-coding downstream 141720 74846128 ~ 74850671 (-)
G296973 NA non-coding upstream 38642 75084041 ~ 75084275 (-)
G296976 NA non-coding upstream 43387 75088786 ~ 75089038 (-)
G297496 NA non-coding upstream 111921 75157320 ~ 75159783 (-)
G297500 NA non-coding upstream 117809 75163208 ~ 75163692 (-)
G297502 NA non-coding upstream 119708 75165107 ~ 75165453 (-)
G296315 NA other downstream 752596 74239187 ~ 74239795 (-)
LOC110520576 NA other downstream 1020561 73960416 ~ 73973401 (-)
G296166 LOC106581959 other downstream 1112020 73877719 ~ 73880371 (-)
LOC110520572 cep97 other downstream 1118574 73870489 ~ 73877576 (-)
G296100 LOC106586751 other downstream 1182795 73808482 ~ 73809596 (-)
G298065 NA other upstream 915148 75960547 ~ 75963074 (-)
G298131 NA other upstream 1009722 76055121 ~ 76057006 (-)
G298192 NA other upstream 1120604 76166003 ~ 76166401 (-)
G299024 NA other upstream 1737444 76782843 ~ 76787731 (-)
pknox1.1 pknox1 other upstream 2791083 77832447 ~ 77844072 (-)

Expression



Co-expression Network