G296932



Basic Information


Item Value
gene id G296932
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 75020894 ~ 75022104 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU336911
agtcactggcttactggtgctcttccatgtcgtccctaggaggggtgcgtcacttgagtgggttgagtcactgacgtggtcttcctgtctgggttggcgcccccccttgggttgtgccgtggcggagatctttgtgggctatactcggccttgtctcaggatggacctgagccctaggacaatgcctcaggactacctggcatgatgactccttgctctcCCCAGTTCCACccggctgtgctgctgctccagtttcagctgttctgcctgtgactatggaaccctgacctgttcactggacgtgctacctgtcccagacctgctgttttcaactctctggaGACAGCGGAAGGTgcagagatactctgaatgattggctatgaaaagccaactgacattcactcctgaggtgctgacctgttgcatcctcgacaactactgtgattattattatttgaccatgctggtcatttatgagcatttgaaaatcttggccatgttctgttttaatctccacccagcacagccagaagaggactggccaccccacatatctTGGTTCCTCTCTGGGTTTCTTTTGGGGGTtttctagccactgtgcttctacacctgcattgcttgctgtttggggttttagactggatttctgtacatcactttgagatatcagctgatgtaagaagggctttataaatacatttgatttgataggagGACATAGGCTTTCActggctacctgagacatgaaataGATAGGTGGGAGGACATATAGGCTGTCGCCAATTTATTAATGCACAATTTCCCTAAATGGTGAAATGGAAACACTTTATCCactacatttattttcatttttgtgAAAaagttctcttttttttttagttgtgatgtcattaagtccagctgtttttatTGACA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU336911 True 915 lncRNA 0.47 2 75020894 75022104

Neighbor


gene id symbol gene type direction distance location
LOC118964329 NA coding downstream 91089 74867279 ~ 74929805 (-)
LOC118964328 NA coding downstream 128574 74891721 ~ 74892320 (-)
LOC118964358 NA coding downstream 143192 74877548 ~ 74877702 (-)
LOC110520587 LOC106586791 coding downstream 340111 74677651 ~ 74680783 (-)
LOC110520585 LOC106586792 coding downstream 375680 74586659 ~ 74645214 (-)
LOC110520594 LOC106586829 coding upstream 512910 75535014 ~ 75579525 (-)
LOC110520593 LOC106586828 coding upstream 559928 75582032 ~ 75628909 (-)
LOC110520599 LOC106586824 coding upstream 832629 75854733 ~ 75919692 (-)
trnaa-ugc-5 NA coding upstream 868261 75890365 ~ 75890437 (-)
LOC110520602 LOC100136552 coding upstream 1080733 76102837 ~ 76118153 (-)
G296798 NA non-coding downstream 117142 74903222 ~ 74903752 (-)
G296780 NA non-coding downstream 154233 74866148 ~ 74866661 (-)
G296770 NA non-coding downstream 170223 74846128 ~ 74850671 (-)
G296769 NA non-coding downstream 172190 74844759 ~ 74848704 (-)
G296973 NA non-coding upstream 61937 75084041 ~ 75084275 (-)
G296976 NA non-coding upstream 66682 75088786 ~ 75089038 (-)
G297496 NA non-coding upstream 135216 75157320 ~ 75159783 (-)
G297500 NA non-coding upstream 141104 75163208 ~ 75163692 (-)
G297502 NA non-coding upstream 143003 75165107 ~ 75165453 (-)
G296315 NA other downstream 781099 74239187 ~ 74239795 (-)
LOC110520576 NA other downstream 1049064 73960416 ~ 73973401 (-)
G296166 LOC106581959 other downstream 1140523 73877719 ~ 73880371 (-)
LOC110520572 cep97 other downstream 1147077 73870489 ~ 73877576 (-)
G296100 LOC106586751 other downstream 1211298 73808482 ~ 73809596 (-)
G298065 NA other upstream 938443 75960547 ~ 75963074 (-)
G298131 NA other upstream 1033017 76055121 ~ 76057006 (-)
G298192 NA other upstream 1143899 76166003 ~ 76166401 (-)
G299024 NA other upstream 1760739 76782843 ~ 76787731 (-)
pknox1.1 pknox1 other upstream 2814378 77832447 ~ 77844072 (-)

Expression



Co-expression Network