G298154


Basic Information

Item Value
gene id G298154
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 76093445 ~ 76096325 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU338260
AATTAGACCAATGACTATGGATTACTACATCTAATTGCAACATCGGCTTCGCTACACCAAACCTGTCCCAGAACAGGGTGATTTACGTCAAGTATTTGAGGTTTCTGAGGTTTATCGTCCTACAAACTCAAAGGTTTGGGAAACGTACATGCTATGGGTCTGAAATCACATGACTTAAAGGACTGTATACCCCAATGCTGGTCCTTTAAGACTAGAGTCCGTGAACACCGGGACATCTGATCCAATGTCTTCCAATCAAAAACTATCAGAGGCGGGATTATGTTTGGCTGGGAAATGTTCTAGTGAAAATGTCACCTAAACTTAATTTCAACGCATTCAGTAAAGTGCCATGTTCCACATCTTTCAATATTTTATAACATCAACTGTTTTTGACAACCaaaatactatatatacagtAGCTTACACAGATCAGAAAGACTGCTAGAGGGTGCAACCTTAACATCAAACATGGAGTGAAAATAAGAGGAAGAGGAAACAACCGATGAATGTACTTGGAAGGGCACATGCTTGTTTGCTCTGCTTAACCCTTGTGTTGTCCTGAGGGTGAAAAATGACccgccactatgtttaacagGAGAGAAAAACCCCTAAATgatattttttcaacttgaaatttgatGACTCTTCCcagagtgaccccaacattagaaaaagtgaaacatcgcctttgttcacatttccatgaaagctgtacaccaccagggtacaaagattgtctaATACCCTGACTACACCATTCGCGTCGCatgcgcgagcgttgcaaaataaatgtagaaatataTGTTATTCAATTACCGCACCCACACTGCTCTCGCGCGCCAaggagcgtctgcgttgccaagggctaaaatagaagtcctttctatttctgacacagatcgcgctgcaagtcctgcctctcccgtctcctcattggtttatagaatcAGGTACCCATTCAGGGAAGAGAGCACCGCCccgcacagcagcctctgcagcgcttgtgaaagctgttcagggggctgaatcttgtcctgatccacccgAGGCTGtagctggggcaggcaagaggaggagatgccaattctgcccccaaagaaggactggaaaataaatactatgtgctgcacatgtgagaaatacatctgcaaagtccatgtacacacacttgcatactgtcctacatgtgctaattagagttgaaTGATTTATGTTCTTGatgttttgttttgtatctattatcttattttattcttatttattgttgttgtttatacaccttaTGGGTCAGGGCAATGGTtcaaaaaatgggagaagacatattttgtagttgaatttcTCATTGTACAGTACATAAGAATATATCATTATGTTGGCAAAAAAATTCAAGACTGTTATTGCTTCCCTTCGATAtaatgcattcaaaactactttctcCACATTactgctactttcttaggctatacaagtgctatctcttgctaaaaaacatatgtttacacctatgcagtccctttagcaataataataataataataacccactactttagtaaagaaaacaataatgacaggtgtgttgtaataaaaacgagtggtgtccacttattaaatgcagtctttctgcattgtgaagagggaatcCCCAGAAATTCACAAAGTTTTTAATGAATGACatgttgtttcttcatgcaaaatagatttagGGTTCaaaattcaattaagctgctttattttaggggtttagtgaaggcgggtcatttttgacccttaGGACAAGAGGAGTATACAGATTGTTAAGGCTACACAAGGGTAGAATTCCCTCTGTCACCCACAGTGTGGTTCTTCAAACACAGGGACCTGCTCTGATAGTTTTACTCTGCTCAATGCCAAAACCCTCCCCAccgggcacacatacacacacatacacactaatctcacacacacacacacacacacacacacacacaccactttagCCCACTCTGACAAATCAATATACCCCAAAACCACAGGGATTAGTTTCTCTTTGTTTTCAAAGTAGGCCAGCGTCAAACTAGCGTGAAATGCAGTACACTACCAGAGGGTACAGAGAGATCTATACAGGAAATGAGCCAGAACTGTCAACATCCTCAAATAACTGGAATCCCCCTAAACACAAGTAATTCACCCTACCAAAAGGGAAAATGTCAGCCCTAATAGGCAGGTGGAATGGTTGGTGATGCGTTGTTAGACGACTGGCACCATCCCGGCAGACTGGCACTGACCTTTTGACCTTTTGCCAGCATGGTGCCAGTCTCCCATGCTGGCAGACTGGCAATCCAGAAGGTCATCAGGTCACCCATAGTATGGTTCTCCAAACACAGGGACCTGCTCTGATAGTTTTACTCTGCTCATTGCCAAAACCCTCCCCaccgggcacacacacacacacacacacacacacacacacacacaatctcataCATATGTTATTGTTTTGACCTGTCTTTCTTTGTTTTAGTTGCAGATCATTACATTGATACATTGATATGGTAGGATATGGTAGGACATGCTTGCCTGTTAGTCCTCGTATCATCATTTGGTCAATGAGCTGTTGTGTATTGGGTGTATTGGTGGTGGGCATGTTAAGAAGTGTGCAAAGACACTACCAGATATAGTATGCGTGCCCCATCGGTACGGATGGTCAACTGCCAACAGCATGTGTAAATAGCCTAAACTTACATTTCCGCCTCCTCGTTATTGGATTGTACTTTCATCACATCATGGACATAATATGGGTATCTAAGACACTCAGTGGTTGGCTGTCAGAATTGTGGACAGAAATCCAGTTCCAGGAGTGGTTAAAATAGGGCAAATTAGAGCAAGACCCACCTGCTCC

Function

NR:

description
PREDICTED: piggyBac transposable element-derived protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU338260 True 2881 lncRNA 0.42 1 76093445 76096325

Neighbor

gene id symbol gene type direction distance location
LOC110520599 LOC106586824 coding downstream 173753 75854733 ~ 75919692 (-)
trnaa-ugc-5 NA coding downstream 203008 75890365 ~ 75890437 (-)
LOC110520593 LOC106586828 coding downstream 464536 75582032 ~ 75628909 (-)
LOC110520594 LOC106586829 coding downstream 513920 75535014 ~ 75579525 (-)
LOC118964329 NA coding downstream 1163640 74867279 ~ 74929805 (-)
LOC110520602 LOC100136552 coding upstream 6512 76102837 ~ 76118153 (-)
LOC118944635 NA coding upstream 63792 76160117 ~ 76171119 (-)
LOC110520604 LOC106586822 coding upstream 423879 76520204 ~ 76857463 (-)
LOC110520605 LOC106586805 coding upstream 769905 76866230 ~ 76869000 (-)
LOC110520607 NA coding upstream 785165 76881490 ~ 76882509 (-)
G298098 NA non-coding downstream 92420 75999839 ~ 76001025 (-)
G298067 NA non-coding downstream 127737 75964940 ~ 75965708 (-)
G298059 NA non-coding downstream 138604 75954528 ~ 75954841 (-)
G298054 NA non-coding downstream 147667 75945518 ~ 75945778 (-)
G298053 NA non-coding downstream 148792 75944425 ~ 75944653 (-)
G298155 NA non-coding upstream 2754 76099079 ~ 76099438 (-)
G298197 NA non-coding upstream 81216 76177541 ~ 76177748 (-)
G298200 NA non-coding upstream 83793 76180118 ~ 76180438 (-)
G298307 NA non-coding upstream 165530 76261855 ~ 76262081 (-)
G298376 NA non-coding upstream 220830 76317155 ~ 76318606 (-)
G298131 NA other downstream 36439 76055121 ~ 76057006 (-)
G298065 NA other downstream 130371 75960547 ~ 75963074 (-)
G296315 NA other downstream 1853650 74239187 ~ 74239795 (-)
LOC110520576 NA other downstream 2121615 73960416 ~ 73973401 (-)
G296166 LOC106581959 other downstream 2213074 73877719 ~ 73880371 (-)
G298192 NA other upstream 69678 76166003 ~ 76166401 (-)
G299024 NA other upstream 686518 76782843 ~ 76787731 (-)
pknox1.1 pknox1 other upstream 1740157 77832447 ~ 77844072 (-)
LOC110520626 ndufv3 other upstream 1748342 77844666 ~ 77850842 (-)
G300200 NA other upstream 1832161 77928486 ~ 77983204 (-)

Expression


Co-expression Network