G298493



Basic Information


Item Value
gene id G298493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 76400612 ~ 76400904 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU338622
aaagtggtcagtgattccatgtctatgcatacagggcagcagcctctaaggtgcagggttgagtaactgagTGGTAGTCGGcgagtgacagtgactaagttcagggcagggtacttggtggaggccagctagtgatggctatttaacagtctgatggccttgagatggaagctgtttttcagtctctctgtcccaactttgatgcacctgtactgaccttgccttctggttgatgtccttgatggtctttttagccttcctgtgacatcgggtgctgtaggtgtcctggagtg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU338622 True 293 lncRNA 0.50 1 76400612 76400904

Neighbor


gene id symbol gene type direction distance location
LOC118944635 NA coding downstream 229493 76160117 ~ 76171119 (-)
LOC110520602 LOC100136552 coding downstream 282459 76102837 ~ 76118153 (-)
LOC110520599 LOC106586824 coding downstream 480920 75854733 ~ 75919692 (-)
trnaa-ugc-5 NA coding downstream 510175 75890365 ~ 75890437 (-)
LOC110520593 LOC106586828 coding downstream 771703 75582032 ~ 75628909 (-)
LOC110520604 LOC106586822 coding upstream 119300 76520204 ~ 76857463 (-)
LOC110520605 LOC106586805 coding upstream 465326 76866230 ~ 76869000 (-)
LOC110520607 NA coding upstream 480586 76881490 ~ 76882509 (-)
LOC110520611 rab9a coding upstream 677834 77078738 ~ 77082651 (-)
LOC110504825 LOC106586814 coding upstream 683349 77084253 ~ 77102688 (-)
G298467 NA non-coding downstream 14837 76385544 ~ 76385775 (-)
G298376 NA non-coding downstream 82006 76317155 ~ 76318606 (-)
G298307 NA non-coding downstream 138531 76261855 ~ 76262081 (-)
G298200 NA non-coding downstream 220174 76180118 ~ 76180438 (-)
G298197 NA non-coding downstream 222864 76177541 ~ 76177748 (-)
G298500 NA non-coding upstream 4504 76405408 ~ 76407066 (-)
G298508 NA non-coding upstream 13406 76414310 ~ 76414629 (-)
G298514 NA non-coding upstream 18599 76419503 ~ 76420000 (-)
G298534 NA non-coding upstream 33232 76434136 ~ 76436695 (-)
G298554 NA non-coding upstream 48078 76448982 ~ 76449228 (-)
G298192 NA other downstream 234211 76166003 ~ 76166401 (-)
G298131 NA other downstream 343606 76055121 ~ 76057006 (-)
G298065 NA other downstream 437538 75960547 ~ 75963074 (-)
G296315 NA other downstream 2160817 74239187 ~ 74239795 (-)
LOC110520576 NA other downstream 2428782 73960416 ~ 73973401 (-)
G299024 NA other upstream 381939 76782843 ~ 76787731 (-)
pknox1.1 pknox1 other upstream 1435578 77832447 ~ 77844072 (-)
LOC110520626 ndufv3 other upstream 1443763 77844666 ~ 77850842 (-)
G300200 NA other upstream 1527582 77928486 ~ 77983204 (-)
G300251 NA other upstream 1633581 78034485 ~ 78035018 (-)

Expression



Co-expression Network