G299242


Basic Information

Item Value
gene id G299242
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 76899873 ~ 76901362 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU339460
GCATATTCTTCATATTAAATTAGAAGGACACATTTTTggtagttaaaaaaaataaaacttttCCAGTGACGTATTGCAAACTGTTGTTTCACCTTGAAAAGATAAAGGCCACAGTGCACCAGGAGTATTAGTTGTCAGGTAGAAGATAGGCTACGTACAGCAGACAAGGCATGTGAAATGATCATTACAATACAACTGTTTTAGATAGTCCCTTGGGAGGAAAGCAGTTTGATATCATTGACAATTATTTCTGTCTAAATATGATCATAGTGAAATATTTGACGTTTAGACATCTTGGCCTGGAGACACTTTATCAATACATATAGAAAGTGGTCTCTACAGAACTCATGGTGTTATAGTTTGTAGTAATTACAGACCCTAAAAGCCTGGTGGATATCATACCAGATCTGAAACGATCACATCATAAACCCTTTTCCGAATCTATTCTTCCACAGCATCAGTGGCTGATAGGTTGTAGACTCGTCACTAGACACAGttaacatttacatttaaaaGCCGGGCCACTTTCAAGAGAGCACAAAGTTGTGGGAACAGGCGGATATCAACATAGTATgtagaacagtggaggctgctgaggggaggacggctcataataatggccggaatggagaaaatggaacggcatcaaacacctggaaaccatggaaaccatatgtttgatgtataTGATACCGATCCACTGAtaccgctccagtcattaccacgagccctctccatttaaggtgccaccaacctcagAACACAcgtctctctgacatgtagaataagtaATAAAACcagttatattaataacattgCTATCTGCAACTTTACACAACGTTCGCCTATTGAATTGGCACCTAAACTTGATGTAAAGAGGAATCTCTACAGTCCACATCAAGCAAAGCAGCCATTACACTCAGCGTTTTAGATTCAGTGTGGCACTGCTACAGGAGTGTGAATCACCAACCTACAACAGCACCGCGGCTCAGGCACTTTGAGCGCCAGCGAGACAAATGGAGCCTTATTCAATCGAACCCACTATCCCAGATTTCCAGgatgagcaaaataaatacaactCTGTTACTCGTTTGATGTCCACTTGACAGAGTAACAATAGATCGGTCAAAGAGTTTTTCCTCAGCTGGTTAAGACTTGTCTTGCTAGGAGGACGAATTCAACCTCCTTCATTTTGGTCAGTATTTCTCTCCTGTCCAGTCTGTATAAATCATACTCCTTACTCTTTTAGCTGGACTTCCCAGCTGTGCATGGGCCTTGACTTGGTGTTGCTTGGAAGGAAAACATTTTAGGGCAGTTCCTCAATGTGCAACGTGTCCCCTCTTTCCAGTCCTCTACTGTGTGTGCCCCGTGGAGAGGGGTGGTTGATCAGCAGGCGTAGGGGGGGTCCTGGTCAGAGAGCGGGTCCCACTTGACAGGGACCAGTCTGGGGAGGTTCTAAGGATGGGGACTGGGATCAGTTGGATCATCTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU339460 True 1490 lncRNA 0.43 1 76899873 76901362

Neighbor

gene id symbol gene type direction distance location
LOC110520607 NA coding downstream 17364 76881490 ~ 76882509 (-)
LOC110520605 LOC106586805 coding downstream 30873 76866230 ~ 76869000 (-)
LOC110520604 LOC106586822 coding downstream 42410 76520204 ~ 76857463 (-)
LOC118944635 NA coding downstream 728754 76160117 ~ 76171119 (-)
LOC110520602 LOC100136552 coding downstream 781720 76102837 ~ 76118153 (-)
LOC110520611 rab9a coding upstream 177376 77078738 ~ 77082651 (-)
LOC110504825 LOC106586814 coding upstream 182891 77084253 ~ 77102688 (-)
LOC110520613 NA coding upstream 248529 77149891 ~ 77151879 (-)
LOC110520614 LOC100302030 coding upstream 250886 77152248 ~ 77164446 (-)
tlr7 LOC106586812 coding upstream 263280 77164642 ~ 77173237 (-)
G299239 NA non-coding downstream 4594 76894739 ~ 76895279 (-)
G299238 NA non-coding downstream 8424 76891055 ~ 76891449 (-)
G299231 NA non-coding downstream 20250 76879258 ~ 76879623 (-)
G299229 NA non-coding downstream 21224 76878394 ~ 76878649 (-)
G299165 NA non-coding downstream 127864 76770045 ~ 76772009 (-)
G299243 NA non-coding upstream 148 76901510 ~ 76902318 (-)
G299244 NA non-coding upstream 1086 76902448 ~ 76902806 (-)
G299245 NA non-coding upstream 3076 76904438 ~ 76904639 (-)
G299246 NA non-coding upstream 3930 76905292 ~ 76905503 (-)
G299247 NA non-coding upstream 5931 76907293 ~ 76907849 (-)
G299024 NA other downstream 112142 76782843 ~ 76787731 (-)
G298192 NA other downstream 733472 76166003 ~ 76166401 (-)
G298131 NA other downstream 842867 76055121 ~ 76057006 (-)
G298065 NA other downstream 936799 75960547 ~ 75963074 (-)
G296315 NA other downstream 2660078 74239187 ~ 74239795 (-)
pknox1.1 pknox1 other upstream 935120 77832447 ~ 77844072 (-)
LOC110520626 ndufv3 other upstream 943305 77844666 ~ 77850842 (-)
G300200 NA other upstream 1027124 77928486 ~ 77983204 (-)
G300251 NA other upstream 1133123 78034485 ~ 78035018 (-)
G300470 NA other upstream 1392421 78293783 ~ 78294220 (-)

Expression


Co-expression Network