G299244



Basic Information


Item Value
gene id G299244
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 76902448 ~ 76902806 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU339462
tgacatcatttacaaacaaagtacTTGTggttagtgagtccgtcagatcagaggcaatagggatgacctgggatggtctcttgataaatgtgtgaattaGCCCATTTTCCTGTCCTACGTATTTAAAATTACTGAGTACTTTGGGTCTCaggtaaaatgtatggagtaaaaagtacattattttctttaggaatgtggtgGTGTAAAAGTTGTAGAAAatatagtaaagtacagaaaaGCTACTTAAGTAAAATTACTTTAAAGAACCACTTAAGTACTTTTGACCAGCAAAGACGAGATGGACAGCTATGCCCAGGCTCCGCCTACATCTAACTCCGTCCCTCTCTACACTCAGAACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU339462 True 359 lncRNA 0.38 1 76902448 76902806

Neighbor


gene id symbol gene type direction distance location
LOC110520607 NA coding downstream 19939 76881490 ~ 76882509 (-)
LOC110520605 LOC106586805 coding downstream 33448 76866230 ~ 76869000 (-)
LOC110520604 LOC106586822 coding downstream 44985 76520204 ~ 76857463 (-)
LOC118944635 NA coding downstream 731329 76160117 ~ 76171119 (-)
LOC110520602 LOC100136552 coding downstream 784295 76102837 ~ 76118153 (-)
LOC110520611 rab9a coding upstream 175932 77078738 ~ 77082651 (-)
LOC110504825 LOC106586814 coding upstream 181447 77084253 ~ 77102688 (-)
LOC110520613 NA coding upstream 247085 77149891 ~ 77151879 (-)
LOC110520614 LOC100302030 coding upstream 249442 77152248 ~ 77164446 (-)
tlr7 LOC106586812 coding upstream 261836 77164642 ~ 77173237 (-)
G299243 NA non-coding downstream 130 76901510 ~ 76902318 (-)
G299242 NA non-coding downstream 1086 76899873 ~ 76901362 (-)
G299239 NA non-coding downstream 7169 76894739 ~ 76895279 (-)
G299238 NA non-coding downstream 10999 76891055 ~ 76891449 (-)
G299231 NA non-coding downstream 22825 76879258 ~ 76879623 (-)
G299245 NA non-coding upstream 1632 76904438 ~ 76904639 (-)
G299246 NA non-coding upstream 2486 76905292 ~ 76905503 (-)
G299247 NA non-coding upstream 4487 76907293 ~ 76907849 (-)
G299276 NA non-coding upstream 59788 76962594 ~ 76962876 (-)
G299278 NA non-coding upstream 63002 76965808 ~ 76966066 (-)
G299024 NA other downstream 114717 76782843 ~ 76787731 (-)
G298192 NA other downstream 736047 76166003 ~ 76166401 (-)
G298131 NA other downstream 845442 76055121 ~ 76057006 (-)
G298065 NA other downstream 939374 75960547 ~ 75963074 (-)
G296315 NA other downstream 2662653 74239187 ~ 74239795 (-)
pknox1.1 pknox1 other upstream 933676 77832447 ~ 77844072 (-)
LOC110520626 ndufv3 other upstream 941861 77844666 ~ 77850842 (-)
G300200 NA other upstream 1025680 77928486 ~ 77983204 (-)
G300251 NA other upstream 1131679 78034485 ~ 78035018 (-)
G300470 NA other upstream 1390977 78293783 ~ 78294220 (-)

Expression



Co-expression Network