Gene
RNA
| Item | Value |
|---|---|
| gene id | G299284 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 76973743 ~ 76974088 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: sex-determining region Y protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU339508 | True | 346 | lncRNA | 0.45 | 1 | 76973743 | 76974088 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520607 | NA | coding | downstream | 91234 | 76881490 ~ 76882509 (-) |
| LOC110520605 | LOC106586805 | coding | downstream | 104743 | 76866230 ~ 76869000 (-) |
| LOC110520604 | LOC106586822 | coding | downstream | 116280 | 76520204 ~ 76857463 (-) |
| LOC118944635 | NA | coding | downstream | 802624 | 76160117 ~ 76171119 (-) |
| LOC110520602 | LOC100136552 | coding | downstream | 855590 | 76102837 ~ 76118153 (-) |
| LOC110520611 | rab9a | coding | upstream | 104650 | 77078738 ~ 77082651 (-) |
| LOC110504825 | LOC106586814 | coding | upstream | 110165 | 77084253 ~ 77102688 (-) |
| LOC110520613 | NA | coding | upstream | 175803 | 77149891 ~ 77151879 (-) |
| LOC110520614 | LOC100302030 | coding | upstream | 178160 | 77152248 ~ 77164446 (-) |
| tlr7 | LOC106586812 | coding | upstream | 190554 | 77164642 ~ 77173237 (-) |
| G299281 | NA | non-coding | downstream | 3595 | 76969946 ~ 76970148 (-) |
| G299280 | NA | non-coding | downstream | 5017 | 76968495 ~ 76968726 (-) |
| G299279 | NA | non-coding | downstream | 5411 | 76968104 ~ 76968332 (-) |
| G299055 | NA | non-coding | downstream | 5786 | 76966981 ~ 76967957 (-) |
| G299278 | NA | non-coding | downstream | 7677 | 76965808 ~ 76966066 (-) |
| G299285 | NA | non-coding | upstream | 29 | 76974117 ~ 76974619 (-) |
| G299286 | NA | non-coding | upstream | 983 | 76975071 ~ 76975324 (-) |
| G299289 | NA | non-coding | upstream | 9227 | 76983315 ~ 76984085 (-) |
| G299291 | NA | non-coding | upstream | 13774 | 76987862 ~ 76988315 (-) |
| G299292 | NA | non-coding | upstream | 14280 | 76988368 ~ 76988825 (-) |
| G299024 | NA | other | downstream | 186012 | 76782843 ~ 76787731 (-) |
| G298192 | NA | other | downstream | 807342 | 76166003 ~ 76166401 (-) |
| G298131 | NA | other | downstream | 916737 | 76055121 ~ 76057006 (-) |
| G298065 | NA | other | downstream | 1010669 | 75960547 ~ 75963074 (-) |
| G296315 | NA | other | downstream | 2733948 | 74239187 ~ 74239795 (-) |
| pknox1.1 | pknox1 | other | upstream | 862394 | 77832447 ~ 77844072 (-) |
| LOC110520626 | ndufv3 | other | upstream | 870579 | 77844666 ~ 77850842 (-) |
| G300200 | NA | other | upstream | 954398 | 77928486 ~ 77983204 (-) |
| G300251 | NA | other | upstream | 1060397 | 78034485 ~ 78035018 (-) |
| G300470 | NA | other | upstream | 1319695 | 78293783 ~ 78294220 (-) |
