Gene
RNA
| Item | Value |
|---|---|
| gene id | G300489 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 78335581 ~ 78336060 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: extracellular matrix protein FRAS1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU340879 | True | 480 | lncRNA | 0.45 | 1 | 78335581 | 78336060 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520639 | LOC106586860 | coding | downstream | 94397 | 78235039 ~ 78241184 (-) |
| LOC110520637 | LOC106586872 | coding | downstream | 108155 | 78219202 ~ 78227426 (-) |
| LOC110520638 | LOC106586858 | coding | downstream | 114855 | 78208473 ~ 78220726 (-) |
| crfb4 | crfb4 | coding | downstream | 143915 | 78174200 ~ 78191666 (-) |
| LOC110520635 | LOC101867533 | coding | downstream | 197057 | 78112838 ~ 78138524 (-) |
| LOC110505446 | LOC106586894 | coding | upstream | 1636569 | 79971886 ~ 79987627 (-) |
| LOC110504879 | LOC106586892 | coding | upstream | 1671825 | 80007885 ~ 80248467 (-) |
| LOC110520643 | LOC106586888 | coding | upstream | 1972359 | 80308419 ~ 80335869 (-) |
| LOC110520645 | LOC106586879 | coding | upstream | 2080889 | 80402867 ~ 80421221 (-) |
| LOC110520647 | LOC106595942 | coding | upstream | 2092731 | 80428791 ~ 80432982 (-) |
| G300484 | NA | non-coding | downstream | 10012 | 78325245 ~ 78325569 (-) |
| G300482 | NA | non-coding | downstream | 18745 | 78316609 ~ 78316836 (-) |
| G300479 | NA | non-coding | downstream | 25773 | 78309525 ~ 78309808 (-) |
| G300478 | NA | non-coding | downstream | 26896 | 78308419 ~ 78308685 (-) |
| G300451 | NA | non-coding | downstream | 79763 | 78255492 ~ 78255818 (-) |
| G300490 | NA | non-coding | upstream | 2107 | 78338167 ~ 78338683 (-) |
| G300492 | NA | non-coding | upstream | 5038 | 78341098 ~ 78341897 (-) |
| G300501 | NA | non-coding | upstream | 16080 | 78352140 ~ 78352413 (-) |
| G300512 | NA | non-coding | upstream | 27587 | 78363647 ~ 78363856 (-) |
| G300514 | NA | non-coding | upstream | 31143 | 78367203 ~ 78367500 (-) |
| G300470 | NA | other | downstream | 41361 | 78293783 ~ 78294220 (-) |
| G300251 | NA | other | downstream | 300563 | 78034485 ~ 78035018 (-) |
| G300200 | NA | other | downstream | 352377 | 77928486 ~ 77983204 (-) |
| LOC110520626 | ndufv3 | other | downstream | 484815 | 77844666 ~ 77850842 (-) |
| pknox1.1 | pknox1 | other | downstream | 496366 | 77832447 ~ 77844072 (-) |
| G301283 | NA | other | upstream | 767289 | 79103349 ~ 79290938 (-) |
| G301282 | NA | other | upstream | 886038 | 79222098 ~ 79223310 (-) |
| G301452 | NA | other | upstream | 1114028 | 79450088 ~ 79450472 (-) |
| G301453 | NA | other | upstream | 1114648 | 79450708 ~ 79450970 (-) |
| G301928 | NA | other | upstream | 1607991 | 79944051 ~ 79944434 (-) |
