Gene
RNA
| Item | Value |
|---|---|
| gene id | G300516 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 78368056 ~ 78368518 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU340909 | False | 395 | lncRNA | 0.39 | 2 | 78368056 | 78368518 |
| TU340910 | True | 361 | lncRNA | 0.39 | 3 | 78368056 | 78368518 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520639 | LOC106586860 | coding | downstream | 126872 | 78235039 ~ 78241184 (-) |
| LOC110520637 | LOC106586872 | coding | downstream | 140630 | 78219202 ~ 78227426 (-) |
| LOC110520638 | LOC106586858 | coding | downstream | 147330 | 78208473 ~ 78220726 (-) |
| crfb4 | crfb4 | coding | downstream | 176390 | 78174200 ~ 78191666 (-) |
| LOC110520635 | LOC101867533 | coding | downstream | 229532 | 78112838 ~ 78138524 (-) |
| LOC110505446 | LOC106586894 | coding | upstream | 1604111 | 79971886 ~ 79987627 (-) |
| LOC110504879 | LOC106586892 | coding | upstream | 1639367 | 80007885 ~ 80248467 (-) |
| LOC110520643 | LOC106586888 | coding | upstream | 1939901 | 80308419 ~ 80335869 (-) |
| LOC110520645 | LOC106586879 | coding | upstream | 2048431 | 80402867 ~ 80421221 (-) |
| LOC110520647 | LOC106595942 | coding | upstream | 2060273 | 80428791 ~ 80432982 (-) |
| G300514 | NA | non-coding | downstream | 556 | 78367203 ~ 78367500 (-) |
| G300512 | NA | non-coding | downstream | 4200 | 78363647 ~ 78363856 (-) |
| G300501 | NA | non-coding | downstream | 15643 | 78352140 ~ 78352413 (-) |
| G300492 | NA | non-coding | downstream | 26159 | 78341098 ~ 78341897 (-) |
| G300490 | NA | non-coding | downstream | 29373 | 78338167 ~ 78338683 (-) |
| G300517 | NA | non-coding | upstream | 2563 | 78371081 ~ 78371397 (-) |
| G300524 | NA | non-coding | upstream | 10852 | 78379370 ~ 78379571 (-) |
| G300525 | NA | non-coding | upstream | 12895 | 78381413 ~ 78381643 (-) |
| G300530 | NA | non-coding | upstream | 21590 | 78390108 ~ 78390361 (-) |
| G300551 | NA | non-coding | upstream | 26700 | 78395218 ~ 78437677 (-) |
| G300470 | NA | other | downstream | 73836 | 78293783 ~ 78294220 (-) |
| G300251 | NA | other | downstream | 333038 | 78034485 ~ 78035018 (-) |
| G300200 | NA | other | downstream | 384852 | 77928486 ~ 77983204 (-) |
| LOC110520626 | ndufv3 | other | downstream | 517290 | 77844666 ~ 77850842 (-) |
| pknox1.1 | pknox1 | other | downstream | 528841 | 77832447 ~ 77844072 (-) |
| G301283 | NA | other | upstream | 734831 | 79103349 ~ 79290938 (-) |
| G301282 | NA | other | upstream | 853580 | 79222098 ~ 79223310 (-) |
| G301452 | NA | other | upstream | 1081570 | 79450088 ~ 79450472 (-) |
| G301453 | NA | other | upstream | 1082190 | 79450708 ~ 79450970 (-) |
| G301928 | NA | other | upstream | 1575533 | 79944051 ~ 79944434 (-) |
