G301828



Basic Information


Item Value
gene id G301828
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 79832618 ~ 79832843 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU342366
actTGGCTGAGGCCAAATGGTTGTTTTAGTCTGTCTACTTGGCTGAGGCCAAATGGTTGTTTTAGTCTGTCTACTTGGCTGAGGCCAAATGGTTGTTTAGCCTGTCTACTTGGCTGAGGCCAAatggttgtttagtctgtctactTGGCTGGGGCCAAATTGTTGTATAGCCTGTCTATTTGGCTGAGGCCGTATGGTTGTTTTAGTCTGTCTACTTGGCTGGGGC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU342366 True 226 lncRNA 0.47 1 79832618 79832843

Neighbor


gene id symbol gene type direction distance location
LOC110504857 efnb2 coding upstream 1304915 78480362 ~ 78527703 (+)
LOC110520642 LOC106586866 coding upstream 1357164 78459147 ~ 78475454 (+)
LOC110520640 LOC106586801 coding upstream 1546869 78273953 ~ 78285749 (+)
LOC101268957 LOC101867533 coding upstream 1660332 78148148 ~ 78172286 (+)
LOC118944722 NA coding upstream 1686895 78139884 ~ 78145723 (+)
LOC110520644 LOC106586891 coding downstream 524101 80356944 ~ 80379895 (+)
LOC110520646 LOC106586886 coding downstream 570289 80403132 ~ 80416847 (+)
ankrd50l LOC106582487 coding downstream 878213 80711056 ~ 80734324 (+)
cnga4 cnga4 coding downstream 1055330 80888173 ~ 80903357 (+)
LOC110520655 LOC106586879 coding downstream 1130131 80962974 ~ 80965465 (+)
G301817 NA non-coding upstream 11779 79820598 ~ 79820839 (+)
G301811 NA non-coding upstream 18638 79813534 ~ 79813980 (+)
G301792 NA non-coding upstream 42970 79789001 ~ 79789648 (+)
G301790 NA non-coding upstream 44247 79788036 ~ 79788371 (+)
G301731 NA non-coding upstream 102225 79729921 ~ 79730393 (+)
G301830 NA non-coding downstream 1429 79834272 ~ 79834540 (+)
G301836 NA non-coding downstream 2995 79835838 ~ 79836170 (+)
G301850 NA non-coding downstream 27325 79860168 ~ 79860385 (+)
G301860 NA non-coding downstream 36341 79869184 ~ 79869467 (+)
G301862 NA non-coding downstream 41763 79874606 ~ 79874937 (+)
G301814 NA other upstream 16035 79815871 ~ 79816583 (+)
G301063 NA other upstream 864495 78961223 ~ 78968123 (+)
G300596 NA other upstream 1347016 78484322 ~ 78485602 (+)
G300026 NA other upstream 1819091 77991980 ~ 78013527 (+)
G298906 NA other upstream 2785179 77046690 ~ 77047439 (+)
G301961 NA other downstream 170742 80003585 ~ 80005155 (+)
G302247 NA other downstream 471762 80304605 ~ 80308343 (+)
G302420 LOC106586884 other downstream 718265 80551108 ~ 80552813 (+)
G302492 NA other downstream 915751 80748594 ~ 80749620 (+)
G302502 cssa25h11orf42 other downstream 946951 80779794 ~ 80780318 (+)

Expression


G301828 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G301828 Expression in each Bioproject

Bar chart with 2 bars.
G301828 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 40.
End of interactive chart.

Co-expression Network