G302085


Basic Information

Item Value
gene id G302085
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 80003568 ~ 80004718 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU342653
cccaagacatttttggggctgactctcgggcttccatccgcgtcgccaagctgcctcctcataccagcgcctctccgctttcgccgcctccagttcttctttggggcggcgatattctccaggctgtgcccagggtccttttccaTCCAACTCCTCTTCCCATGCCCAGtactcctcgcgctgctcctgctgcctttcaccacgccgcttggtcctgttgtggtgggtgattctgttacggttttcttctcctctgacgaggaggtgTAGCGatgatcggaccaaaatgcagcatggttgttattcatgttttttaatgaagaaaactatacatgaataaactaacaaaacaataaatgtgagaaaacctaaacagcctatctggtgacaacaaacacaaagacaggaacaatcacccacgaaacactcaaagaatatggctgcctaaatatggttcccaatcagagacaatgataaacacctgcctctgattgagaaccaatacctaacaaaaaccccaagacaaaacacaccacatacaaaacccatgtcacaccctggcctgaccaaattaataaagaaaacacaaaatactaagaccagggcgtgacatataCATTATGTCTCAGTATTTACTTTACTGTCCATTAGGTTCGTGTTTGAGTTAGTAACAGTGCCGTTAACTTCAATGGCTgggaaaaaataaacatattctaCTGATTGACAAACAGGGTGTTTTTgtatgttttggggggggggggattttctaTCAACTGTACAACAACAACCCTCGTTTAGATGATTGTTTTTCTGTAGACGTTGTTACCTACCTGTTTAATGAATCATGGTACCGAACTATGGTTCTGTCCAATGTCACTGGAACCCCTTTGGTCCAAACAAACGGTTTGGTTTCCAAGACAACCGTTTGGTTCTTTTCTCAACAATGGCAGTATAAAGTGTGTCTTTTTTTAATGGATTCTACCACCTGTTGATCTTGTTGACATTATAGTAGGTTATTAGAGAGGACTgaagaaaaaaattaaataactgaaaatgtttttttggttTGTTGTTGATGCAAATGGAACATGGGAAATAAACATTGATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU342653 True 1110 lncRNA 0.42 2 80003568 80004718

Neighbor

gene id symbol gene type direction distance location
LOC110505446 LOC106586894 coding downstream 15941 79971886 ~ 79987627 (-)
LOC110520639 LOC106586860 coding downstream 1762384 78235039 ~ 78241184 (-)
LOC110520637 LOC106586872 coding downstream 1776142 78219202 ~ 78227426 (-)
LOC110520638 LOC106586858 coding downstream 1782842 78208473 ~ 78220726 (-)
crfb4 crfb4 coding downstream 1811902 78174200 ~ 78191666 (-)
LOC110504879 LOC106586892 coding upstream 3167 80007885 ~ 80248467 (-)
LOC110520643 LOC106586888 coding upstream 303701 80308419 ~ 80335869 (-)
LOC110520645 LOC106586879 coding upstream 412231 80402867 ~ 80421221 (-)
LOC110520647 LOC106595942 coding upstream 424073 80428791 ~ 80432982 (-)
olig1 LOC106586885 coding upstream 519375 80524093 ~ 80525529 (-)
G302097 NA non-coding downstream 1283 80002061 ~ 80002285 (-)
G302089 NA non-coding downstream 34121 79968918 ~ 79969447 (-)
G302088 NA non-coding downstream 36969 79966074 ~ 79966599 (-)
G301942 NA non-coding downstream 43170 79960129 ~ 79960398 (-)
G302101 NA non-coding upstream 14612 80019330 ~ 80019956 (-)
G302138 NA non-coding upstream 94043 80098761 ~ 80184066 (-)
G302153 NA non-coding upstream 129249 80133967 ~ 80134321 (-)
G302178 NA non-coding upstream 177785 80182503 ~ 80183390 (-)
G302189 NA non-coding upstream 198103 80202821 ~ 80203357 (-)
G301928 NA other downstream 59134 79944051 ~ 79944434 (-)
G301453 NA other downstream 552598 79450708 ~ 79450970 (-)
G301452 NA other downstream 553096 79450088 ~ 79450472 (-)
G301283 NA other downstream 712630 79103349 ~ 79290938 (-)
G302117 NA other upstream 44903 80049621 ~ 80051285 (-)
G302399 LOC106581475 other upstream 503217 80507935 ~ 80508297 (-)
G302660 NA other upstream 676268 80680986 ~ 80683186 (-)
G302724 NA other upstream 715999 80720717 ~ 80721681 (-)

Expression


Co-expression Network