G302247


Basic Information

Item Value
gene id G302247
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 80304605 ~ 80308343 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU342848
gcaacacagtcagacagcaacacagcaacacagccagACACCCAGACAGAAAGTTATAGAGAATGGAGTGATACAACAACACTGGCTGTCCTGGTGTAGCTACTGTCTGAGAGGGAGCCCACTGTAGTCTGGTACAGTTATCAGCCTTTCTCCAATAAGTGTAATTCACAGGCCCACTCAAACACCAGGGTAAATcgaatcaaatccaattgtattcgtcacatgcactgaatacaacaggtgtagactttaccgtgaaatgccctTCCCTGCCAGCCAGCCCTTCTCTACCAGCCAGCCCTTCCCTGCCAGCCCTTCTCTACCAGCCAGCCCTTCCTTGCCAGCCCTTCCCTGCCAGCCAGCCCTTCCCTGCCAGCCAGCCCTTCCCTTTATAATGCCATTATACAATTATTCTCAACATTGATCTGCTCTGACCAATCAGAAAATGGATACAACATTCATTTCATTtgtcactttatataatgttatcAACCATCTTCACATATTTCCTCAGGACATTTTGAGATGAAAACATATAACAGAATGCAGATATGTGATGATACAACTGTcacatcattttttttaaacacatttttgatcaaatgtagagatgcccagcatataaaatgtagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagatgcccaccatataaaatgtagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagatgtccaacatataaaatgtagagatgtccatcatataaaatgtagagatgcccaacatataaaatgtagagatgtccaacatataaaatgtagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagatgc
>TU342850
taaaatgtagagatgcccaacatataaaatgtagagatgtccaacatataaaatgtagagatgcccatcatttaaaatgtagagatgcccaacatataaaatgtagagatgccaaacatataaaatgtagagatgcccaccatataaaatgtagagatgccaaacatataaaatgtagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagatgcccagcatataaaatgtagagatgcccaacatataaaatgtagagatgcccagcatataaaatgtagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagataTCCAtcatataaaatgtagagatgtccatcatataaaatgtagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagatgtccatcatataaaatgtagagatgcccaacatataaaatgtagagatgtccaacatataaaatgtagagatgcccaacatataaaatgtagagatgtccaacatataaaatgtagagatgcccaacatataaaatgtagagatgcccaccatataaaatgtagagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagatgcccaacatataaaatgtagagatgcccaccatataaaatgtagagatgcccaacatataaaatgtagagatgcccaccatataaaatgtagagatgcccaCCATATAAAATGTAGCGATGCCCAccatataaaatgtagagatgcccaccatataaaatgtagagatgcccaccatataaaatgtagagatgcccaacatataaaatgtaga

Function

NR:

description
extensin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU342848 False 1000 TUCP 0.40 2 80304605 80307816
TU342850 True 973 lncRNA 0.33 2 80307151 80308343
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110504857 efnb2 coding upstream 1779448 78480362 ~ 78527703 (+)
LOC110520642 LOC106586866 coding upstream 1831697 78459147 ~ 78475454 (+)
LOC110520640 LOC106586801 coding upstream 2021402 78273953 ~ 78285749 (+)
LOC101268957 LOC101867533 coding upstream 2134865 78148148 ~ 78172286 (+)
LOC118944722 NA coding upstream 2161428 78139884 ~ 78145723 (+)
LOC110520644 LOC106586891 coding downstream 48601 80356944 ~ 80379895 (+)
LOC110520646 LOC106586886 coding downstream 94789 80403132 ~ 80416847 (+)
ankrd50l LOC106582487 coding downstream 402713 80711056 ~ 80734324 (+)
cnga4 cnga4 coding downstream 579830 80888173 ~ 80903357 (+)
LOC110520655 LOC106586879 coding downstream 654631 80962974 ~ 80965465 (+)
G302248 NA non-coding upstream 115 80306515 ~ 80307036 (+)
G302240 NA non-coding upstream 8903 80295554 ~ 80298248 (+)
G302230 NA non-coding upstream 16567 80290360 ~ 80290584 (+)
G302057 NA non-coding upstream 38476 80210116 ~ 80268675 (+)
G302008 NA non-coding upstream 216692 80089453 ~ 80090459 (+)
G302255 NA non-coding downstream 11548 80319891 ~ 80321536 (+)
G302323 NA non-coding downstream 89794 80398137 ~ 80398359 (+)
G302324 NA non-coding downstream 90208 80398551 ~ 80398813 (+)
G302334 NA non-coding downstream 96320 80404663 ~ 80405297 (+)
G302339 NA non-coding downstream 102773 80411116 ~ 80413526 (+)
G301961 NA other upstream 301996 80003585 ~ 80005155 (+)
G301814 NA other upstream 490568 79815871 ~ 79816583 (+)
G301063 NA other upstream 1339028 78961223 ~ 78968123 (+)
G300596 NA other upstream 1821549 78484322 ~ 78485602 (+)
G300026 NA other upstream 2293624 77991980 ~ 78013527 (+)
G302420 LOC106586884 other downstream 242765 80551108 ~ 80552813 (+)
G302492 NA other downstream 440251 80748594 ~ 80749620 (+)
G302502 cssa25h11orf42 other downstream 471451 80779794 ~ 80780318 (+)
G302494 LOC106582473 other downstream 490280 80798623 ~ 80800532 (+)
znf804a LOC106582504 other downstream 1062402 81370360 ~ 81530812 (+)
G301999 NA non-coding upstream 224067 80079845 ~ 80080538 (+)

Expression

G302247 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
End of interactive chart.

G302247 Expression in each Bioproject

Bar chart with 18 bars.
G302247 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 30.
End of interactive chart.

Co-expression Network