G302658


Basic Information

Item Value
gene id G302658
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 80678598 ~ 80680866 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU343411
GCCTTGCTCAAGTGCAGAATGGCAGATTGATTTCATTTTGAAGACAACCCTGCCATTAACTACCTGTCATTTTTCAATTAGTCTCTATCTATGTTATGACCTGGTTCACAGGCTATGCCGCATGAAGTGTAGTGAAAGAACAATCAACACAGACACCTGAGCAATGGTCACTAGTATCCAGAGAGAAAACACCACTGGCAGCATATTTCGCTGGTGTATTTTGTCAGAGTAAGATCAATCGGGATAGATTTCACTGGGTCTTGTGGATTTGGCCGTGTAGGCTTGGTTATCAGCTGGGTGAAATTTAGCTCAGCACAAAATATCTTTCAATGCAATTCAGACTAAGATCGTCCTTTGTTAATAGTTCAAAGTTATCATTCTTAGATAACAAGTCAAACAGTTTGTCAGGAGAACATGAGGGGAAAGCCAAGGGAGCAGGGCGATTTACAATTCCCACTAACGTTAGCTGGATATTAATACCAAAGCCAACATAGATTTTcaaactggctccaggtcatctataagtccatGCTAGGCCTTATCTCAGttcaacacccacccgtagcacgcgctccagcaggtgtatctcactgatcatcgctaaagccaacacctcatttggccgcctttcgttccagttctctgctgcctgtttctggaacgaattgcaaaaatcgttgaagttggagacttttatctccctcaccaacttcaaacatctgctatctgagcagctaaccgatcgctgcagctgtacatagtccatcggtaaatagcccacccaatttacctacctcatccccatactgtttttatttatttacttttctgctcttttgcacaccagtatctctacctgcacatgttcatctgatcatttatcactccagtgttaatctgctaaattgtaattattcgcctacctcctcatgacttttgcacacaatgtacatagactctcttttttttcctactgtgttattgacttgtttattgtttactccatgtgttgttgtctgttcacactgctatgctttatcttggccaggtcgcagttgcaaatgagaacttgttctcaactagcctacctggttaaataaaggtgaaataaataaaaaataaataaaaatagattttcaaACTGCTTAGGGACAGAGGTGAATTACAGAAACATTTAAATGAGctattatttgataaaatattgaatttggtctTTACTACtacagcccatagaaacgcattgattaacacattcataaatggtaaaagaaaaagacagtcaaaaaataaatcagaagtaataaggttttgaagtgtctgtccttaTGTCTAGGAGATggaagaaagctcaggaaatattttaGGTTTTtatggacacatatttaaccccttatttttgttggcacaaaacgaCCTCCATACTTCCAGACCAGTCCCGTCACACTTGTGGGGGTTGTAAGAGAGTCTTGTAGAGAGTCTTGTTCATGAGAGTctcctttccatagagtggtcagaATCATTTCTAGGCCAAACACTTCcagacgctacagacgttttttGTGAGAagaacattttcttttttttaggatgtctcatggtctgacaaacatcgctgtagctcaggcccaccttccacagcagatggaatctctcatggtctgacaaacatcgctgTAGCTCAGGACACCTTCCACCACAGAAGGAatctctcatggtctgagaaacaTCGCTGTAGCTCAGGCCACCTTCCACAGCAGATGCAGAAGGCCGACATTGGCGGATTTGATGGATGGATATCTCTATCTTAACCCCCTAAGGTTGACGTCCCACGTCcgcggaaatctaattagcataatacaaaaatcctaATTTAAAAacctgtcagtttaagctagagatatccgtTTTTTGGggattggatgcgtctcaatccaccacatcagCCTATGTCGGCCTGTGTCGGCCTGTGTCGGCCTGTGTcgagccccgaaacctgaaggatctggagaaggtctgtatggaggagtgggacaaaatccctgctgcagtgtgtgcaaacctggtcaagaactacagaaaacgtatgatctctgtaattggcaaacaaaggtttctgtaccaaatattaagttctgcttttctgatgtatcaaatacttatgtcatggaataaaatgct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU343411 True 2178 lncRNA 0.41 3 80678598 80680866

Neighbor

gene id symbol gene type direction distance location
hpxa hpx coding downstream 19938 80645997 ~ 80658660 (-)
LOC110520649 LOC106586884 coding downstream 125331 80551048 ~ 80553267 (-)
olig1 LOC106586885 coding downstream 153069 80524093 ~ 80525529 (-)
LOC110520647 LOC106595942 coding downstream 245616 80428791 ~ 80432982 (-)
LOC110520645 LOC106586879 coding downstream 257377 80402867 ~ 80421221 (-)
LOC110518808 fam160a2 coding upstream 116129 80796995 ~ 80874124 (-)
LOC110520653 LOC106586906 coding upstream 224174 80905040 ~ 80908349 (-)
LOC110520654 LOC106586898 coding upstream 298272 80979138 ~ 80984383 (-)
LOC110520656 LOC106586902 coding upstream 331232 81012098 ~ 81038367 (-)
si:dkey-69o16.5 pepe coding upstream 1195755 81876621 ~ 81887719 (-)
G302663 NA non-coding downstream 40844 80636230 ~ 80637754 (-)
G302694 NA non-coding downstream 44125 80634228 ~ 80634473 (-)
G302690 NA non-coding downstream 48211 80630177 ~ 80630387 (-)
G302670 NA non-coding downstream 116058 80562331 ~ 80562540 (-)
G302659 NA non-coding upstream 3863 80684729 ~ 80688496 (-)
G302706 NA non-coding upstream 8260 80689126 ~ 80689338 (-)
G302673 NA non-coding upstream 111391 80792257 ~ 80794498 (-)
G302761 NA non-coding upstream 125302 80806168 ~ 80806890 (-)
G302765 NA non-coding upstream 136906 80817772 ~ 80818703 (-)
G302399 LOC106581475 other downstream 170301 80507935 ~ 80508297 (-)
G302117 NA other downstream 627313 80049621 ~ 80051285 (-)
G301928 NA other downstream 734164 79944051 ~ 79944434 (-)
G301453 NA other downstream 1227628 79450708 ~ 79450970 (-)
G302660 NA other upstream 120 80680986 ~ 80683186 (-)
G302724 NA other upstream 39851 80720717 ~ 80721681 (-)
G302725 NA other upstream 40872 80721738 ~ 80722623 (-)
G303663 NA other upstream 1340522 82021388 ~ 82022265 (-)
G303665 NA other upstream 1341963 82022829 ~ 82023451 (-)

Expression


Co-expression Network