Gene
RNA
| Item | Value |
|---|---|
| gene id | G302777 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 80850156 ~ 80850752 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU343557 | False | 280 | lncRNA | 0.35 | 2 | 80850156 | 80850752 |
| TU343555 | True | 401 | lncRNA | 0.35 | 2 | 80850281 | 80850752 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hpxa | hpx | coding | downstream | 191496 | 80645997 ~ 80658660 (-) |
| LOC110520649 | LOC106586884 | coding | downstream | 296889 | 80551048 ~ 80553267 (-) |
| olig1 | LOC106586885 | coding | downstream | 324627 | 80524093 ~ 80525529 (-) |
| LOC110520647 | LOC106595942 | coding | downstream | 417174 | 80428791 ~ 80432982 (-) |
| LOC110520645 | LOC106586879 | coding | downstream | 428935 | 80402867 ~ 80421221 (-) |
| LOC110520653 | LOC106586906 | coding | upstream | 54288 | 80905040 ~ 80908349 (-) |
| LOC110520654 | LOC106586898 | coding | upstream | 128386 | 80979138 ~ 80984383 (-) |
| LOC110520656 | LOC106586902 | coding | upstream | 161346 | 81012098 ~ 81038367 (-) |
| si:dkey-69o16.5 | pepe | coding | upstream | 1025869 | 81876621 ~ 81887719 (-) |
| slc23a3 | LOC106586913 | coding | upstream | 1116378 | 81967130 ~ 81979522 (-) |
| G302771 | NA | non-coding | downstream | 14250 | 80834394 ~ 80835906 (-) |
| G302765 | NA | non-coding | downstream | 31453 | 80817772 ~ 80818703 (-) |
| G302761 | NA | non-coding | downstream | 43266 | 80806168 ~ 80806890 (-) |
| G302673 | NA | non-coding | downstream | 55658 | 80792257 ~ 80794498 (-) |
| G302706 | NA | non-coding | downstream | 160818 | 80689126 ~ 80689338 (-) |
| G302811 | NA | non-coding | upstream | 89710 | 80940462 ~ 81037215 (-) |
| G302826 | LOC106586879 | non-coding | upstream | 113603 | 80964355 ~ 80965230 (-) |
| G302848 | NA | non-coding | upstream | 152199 | 81002951 ~ 81003318 (-) |
| G302857 | NA | non-coding | upstream | 178489 | 81029241 ~ 81029724 (-) |
| G302862 | NA | non-coding | upstream | 189653 | 81040405 ~ 81040901 (-) |
| G302725 | NA | other | downstream | 127533 | 80721738 ~ 80722623 (-) |
| G302724 | NA | other | downstream | 128475 | 80720717 ~ 80721681 (-) |
| G302660 | NA | other | downstream | 166970 | 80680986 ~ 80683186 (-) |
| G302399 | LOC106581475 | other | downstream | 341859 | 80507935 ~ 80508297 (-) |
| G303663 | NA | other | upstream | 1170636 | 82021388 ~ 82022265 (-) |
| G303665 | NA | other | upstream | 1172077 | 82022829 ~ 82023451 (-) |
| pard3bb | LOC106601765 | other | upstream | 1447004 | 82297732 ~ 82586082 (-) |
| LOC110505453 | LOC106586926 | other | upstream | 1894492 | 82744854 ~ 82747738 (-) |
| G304204 | LOC107714908 | other | upstream | 1980618 | 82831370 ~ 82851751 (-) |
