Gene
RNA
| Item | Value |
|---|---|
| gene id | G302857 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 81029241 ~ 81029724 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU343652 | True | 454 | lncRNA | 0.50 | 2 | 81029241 | 81029724 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110520654 | LOC106586898 | coding | downstream | 44858 | 80979138 ~ 80984383 (-) |
| LOC110520653 | LOC106586906 | coding | downstream | 120892 | 80905040 ~ 80908349 (-) |
| LOC110518808 | fam160a2 | coding | downstream | 155117 | 80796995 ~ 80874124 (-) |
| hpxa | hpx | coding | downstream | 370581 | 80645997 ~ 80658660 (-) |
| LOC110520649 | LOC106586884 | coding | downstream | 475974 | 80551048 ~ 80553267 (-) |
| si:dkey-69o16.5 | pepe | coding | upstream | 846897 | 81876621 ~ 81887719 (-) |
| slc23a3 | LOC106586913 | coding | upstream | 937406 | 81967130 ~ 81979522 (-) |
| LOC110510426 | bin1 | coding | upstream | 964327 | 81994051 ~ 82040699 (-) |
| LOC118964332 | NA | coding | upstream | 993111 | 82022835 ~ 82023180 (-) |
| LOC118964333 | NA | coding | upstream | 993555 | 82023279 ~ 82023723 (-) |
| G302848 | NA | non-coding | downstream | 25923 | 81002951 ~ 81003318 (-) |
| G302826 | LOC106586879 | non-coding | downstream | 64011 | 80964355 ~ 80965230 (-) |
| G302777 | NA | non-coding | downstream | 178489 | 80850156 ~ 80850752 (-) |
| G302771 | NA | non-coding | downstream | 193335 | 80834394 ~ 80835906 (-) |
| G302765 | NA | non-coding | downstream | 210538 | 80817772 ~ 80818703 (-) |
| G302862 | NA | non-coding | upstream | 10681 | 81040405 ~ 81040901 (-) |
| G302863 | NA | non-coding | upstream | 11635 | 81041359 ~ 81041942 (-) |
| G302866 | NA | non-coding | upstream | 16415 | 81046139 ~ 81046594 (-) |
| G302873 | NA | non-coding | upstream | 27814 | 81057538 ~ 81058150 (-) |
| G302874 | NA | non-coding | upstream | 28461 | 81058185 ~ 81058603 (-) |
| G302725 | NA | other | downstream | 306618 | 80721738 ~ 80722623 (-) |
| G302724 | NA | other | downstream | 307560 | 80720717 ~ 80721681 (-) |
| G302660 | NA | other | downstream | 346055 | 80680986 ~ 80683186 (-) |
| G302399 | LOC106581475 | other | downstream | 520944 | 80507935 ~ 80508297 (-) |
| LOC110520645 | LOC106586879 | other | downstream | 608096 | 80402867 ~ 80421221 (-) |
| G303663 | NA | other | upstream | 991664 | 82021388 ~ 82022265 (-) |
| G303665 | NA | other | upstream | 993105 | 82022829 ~ 82023451 (-) |
| pard3bb | LOC106601765 | other | upstream | 1268032 | 82297732 ~ 82586082 (-) |
| LOC110505453 | LOC106586926 | other | upstream | 1715520 | 82744854 ~ 82747738 (-) |
| G304204 | LOC107714908 | other | upstream | 1801646 | 82831370 ~ 82851751 (-) |
