G303300


Basic Information

Item Value
gene id G303300
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 81415138 ~ 81422251 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU344178
gtcagctcggggatttgaacttgcaacctttcggtaactagtccaactctctaaccactaggctaccctgccgtgaTGTGGACGACGGACAGGGGGAAACACAGCAGAACCCGGGGGATGAATCATGACGTAAGGAAAGGAAGGCTGCTGATATCTTCCTCTCCAACCAAGGTGGATGAATTGAGAAGGTTTAGCAGATGTTCAGGAACAGTGGCCCTTGTCTCCCAAACTGTCTAGTCTGATCTAAAGGGGTGTCGTGTTGTGTTGTATCAGATGTCCAGTGTAACACCCGCTGGCTCCCTGGGGTCCGGCCTGTACCCCTACTGCAACCCTAGTCTTATCCGTCATCTAACACCACTTTACTGTAACCCTAGTCTTATCcatcatctaacaccactatactgtaacCCTAGTCTTATCcatcatctaacaccactatactgtaacCCTAGTCTTATCCgtcatctaacaccactatactgtaacCCTAGTCTTATCCATCATCTAACATCACTATAATGTAACCCTAGTCTTATCcatcatctaacaccactatactgtaacCCTAGTCTTATCcatcatctaacaccactatactgtaacCCTAGTCGTATCcatcatctaacaccactatactgtaacCCTAGTCGTATCcatcatctaacaccactatactgtaacCCTAGTCTTATCCATCATCTAACACCACTTTACTGTAACCCTAGTCTTATCcatcatctaacaccactatactgtaacCCTAGTCTTATCcatcatctaacaccactatactgtaacCCTAGTCTTATCCATCATCTAACATCACTATAATGTAACCCTAGTCTTATCCATCATCTAACACCACTTTACTGTAACCCTAGTCTTATCCATCATCTAACATCACTATACTGTAACCCTAGTCTTATCcatcatctaacaccactatactgtaacCCTAGTCTTATCCATCATCTAACACCAATATACTGTAA

Function

NR:

description
PREDICTED: probable basic-leucine zipper transcription factor F

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU344178 True 992 lncRNA 0.43 2 81415138 81422251

Neighbor

gene id symbol gene type direction distance location
LOC110520656 LOC106586902 coding downstream 376771 81012098 ~ 81038367 (-)
LOC110520654 LOC106586898 coding downstream 430755 80979138 ~ 80984383 (-)
LOC110520653 LOC106586906 coding downstream 506789 80905040 ~ 80908349 (-)
LOC110518808 fam160a2 coding downstream 541014 80796995 ~ 80874124 (-)
hpxa hpx coding downstream 756478 80645997 ~ 80658660 (-)
si:dkey-69o16.5 pepe coding upstream 454370 81876621 ~ 81887719 (-)
slc23a3 LOC106586913 coding upstream 544879 81967130 ~ 81979522 (-)
LOC110510426 bin1 coding upstream 571800 81994051 ~ 82040699 (-)
LOC118964332 NA coding upstream 600584 82022835 ~ 82023180 (-)
LOC118964333 NA coding upstream 601028 82023279 ~ 82023723 (-)
G303299 NA non-coding downstream 5697 81408548 ~ 81409441 (-)
G303282 NA non-coding downstream 34174 81377360 ~ 81380964 (-)
G303277 NA non-coding downstream 44047 81369608 ~ 81371091 (-)
G303075 NA non-coding downstream 75805 81338703 ~ 81339333 (-)
G303015 NA non-coding downstream 150311 81264186 ~ 81264827 (-)
G303306 NA non-coding upstream 13985 81436236 ~ 81436699 (-)
G303350 NA non-coding upstream 89343 81511594 ~ 81512478 (-)
G303359 NA non-coding upstream 110467 81532718 ~ 81533494 (-)
G303361 NA non-coding upstream 119638 81541889 ~ 81568573 (-)
G303370 NA non-coding upstream 148836 81571087 ~ 81571722 (-)
G302725 NA other downstream 692515 80721738 ~ 80722623 (-)
G302724 NA other downstream 693457 80720717 ~ 80721681 (-)
G302660 NA other downstream 731952 80680986 ~ 80683186 (-)
G302399 LOC106581475 other downstream 906841 80507935 ~ 80508297 (-)
LOC110520645 LOC106586879 other downstream 993993 80402867 ~ 80421221 (-)
G303663 NA other upstream 599137 82021388 ~ 82022265 (-)
G303665 NA other upstream 600578 82022829 ~ 82023451 (-)
pard3bb LOC106601765 other upstream 875505 82297732 ~ 82586082 (-)
LOC110505453 LOC106586926 other upstream 1322993 82744854 ~ 82747738 (-)
G304204 LOC107714908 other upstream 1409119 82831370 ~ 82851751 (-)

Expression


Co-expression Network