G304463 (LOC106586931)


Basic Information

Item Value
gene id G304463
gene name LOC106586931
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 83307137 ~ 83311214 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU345690
tccttcctctctctgtctctctcctctctctgtctcccccctctctctgtctcccatcatctctctgtgaactatatctctctgtctatctcctctctctctctctgcaatccATAggttgcaacaacaaaaaataaaataataatgtttCACAGAGCGTCACACCATGTGATACAGATCATCAGACAGTCAGAaatcaaaatacaaaaaaaaagacaatcCTAATACTTCTTCTTGAGGAACGCAACTTAACGACCTTCATGGTCTTTAGATAAAATTCTTCTTCTTTCTTCGCCATTCTCTTCTTCTATTACAGACGGGAAGCAGCCTGCAATAAGAACACATCAAATACCATAACAGACAAGCTGAACTGAAGGTGGTGGTTGACTGTTGACACTAaattaatgtaaaaaaataaataaaaaatggcaCGAGAACAAGAGATGTCTATAGGGCGATAAAACTGAAGCTGATCCTAATAAGATCCTAATTAAGATCATAATAAGATCCTAATAAGATCCTAATAAGATCCTAATACGATCCTAATAGGATCCTAATAAGATCCTAAAACTGAACTGAAAACTGTCCACGATAGTCTATGACACTGTTTTAAACATAACGCAGGCCGAGACGAGCTAGAATCAACATTCTAAAACCGTCCTAATGCAACTCATTATCTAACTTCAATCATAACCAAAAACAAAATATCTTCTTAATTCTTTACAAATCTAGTTGAATTTAATTTAAATCTTTTTTGGGGGGATAGGCATTAGATTGATATGTTTTGATATCGTTCAGAATGGTCCACTGGCAGCAGAACAGCTCTGACTGCCCAGACTGACAGTAGGAGATCAGGTCCAAGCTCAGACTGACAGTAGGAGATCAGGTCCAAGCCCAGACTGACAGTAGGAGTTCAGGTCCAAGCCCAGACGGACAGTAGGAGTTTGATTCCAAGCCCAGACTGACAGTAAGTCTTCAGGTACAAACCCAGACTGACAGTAGGAGTTCAGGTCCAAACCCAGACTGACAGTATGAGATCAGGTCCAAGCCCAGACGGATAGTAGGGGTTTGAGTCCAAGCCCAGACGGACAGTAGGAGATCAGGTCCAAGCCCAGACTGACAGTAGGAGTTTGAGTCCAAGCCCAGACTGACAGTAGGAGTTTGAGTCCAAGCCTTGACTGACAGTAGGAGTTCAGGTCCAAGCCCAGATTGACAGTAGGAGTTTGAATCCAAGCCAAGACTGACAGTAAGTGTTCAGGTCCAAGCCCAGACGGACAGTAAGTGTTCAGGTCCAAGCCCAGACTGACAGTAGGAGTTCAGGGCCAAGCCCAGACTGACATAAAGTGTTCAGTTCCAAGCCCAGACTTCTATGGTCCACTGGCCAGTACGTGTGGCATCATGGCAGGTAAGTGTGGTTCATTCCCAAGGTTTGATTGATCAGGGCCTCTCCTGCAGGCAGAGAAGAGACCCccgaggggtgggggggggagggtCTAGCGGGTGTATCTGTCTGTATGTCGTTGTCATCAAGCATTAAGCACGTCTTTGGGTTGGAACAGCCCAAGGGCTTGAAGGACTAGGCCTTCCGGTGGAGGAAAGCGTCCTAGGCCTCGGAGCAACAGCGTTGCTGGTTGATCTTCACCTTGTGTTTGATCCCGTCGTACAGCTCAAAGTTGTAGTTCTCCAATGTGGTGGAGCTCCGTGACGACAGGCCGCTGTAGTAGCAGGTGCAGTAGAGCAGCAGGCCGCCACACACCGCCCCCAGCAGTACGCCCAGGGAAGACATGACGATGATGGTGACCAGGATAGGATCCAGGGTGTACAGCCACGAGTTGTCCTTCTCAGAGACACGTGTCACAGGGGGGTCCATGGACGGGCCAGGGGTACTCCACTCTGGGAACGGGAAACCT
>TU345689
tccttcctctctctgtctctctcctctctctgtctcccccctctctctgtctcccatcatctctctgtgaactatatctctctgtctatctcctctctctctctctgcaatccATAggttgcaacaacaaaaaataaaataataatgtttCACAGAGCGTCACACCATGTGATACAGATCATCAGACAGTCAGAaatcaaaatacaaaaaaaaagacaatcCTAATACTTCTTCTTGAGGAACGCAACTTAACGACCTTCATGGTCTTTAGATAAAATTCTTCTTCTTTCTTCGCCATTCTCTTCTTCTATTACAGACGGGAAGCAGCCTGCAATAAGAACACATCAAATACCATAACAGACAAGCTGAACTGAAGGTGGTGGTTGACTGTTGACACTAaattaatgtaaaaaaataaataaaaaatggcaCGAGAACAAGAGATGTCTATAGGGCGATAAAACTGAAGCTGATCCTAATAAGATCCTAATTAAGATCATAATAAGATCCTAATAAGATCCTAATAAGATCCTAATACGATCCTAATAGGATCCTAATAAGATCCTAAAACTGAACTGAAAACTGTCCACGATAGTCTATGACACTGTTTTAAACATAACGCAGGCCGAGACGAGCTAGAATCAACATTCTAAAACCGTCCTAATGCAACTCATTATCTAACTTCAATCATAACCAAAAACAAAATATCTTCTTAATTCTTTACAAATCTAGTTGAATTTAATTTAAATCTTTTTTGGGGGGATAGGCATTAGATTGATATGTTTTGATATCGTTCAGAATGGTCCACTGGCAGCAGAACAGCTCTGACTGCCCAGACTGACAGTAGGAGATCAGGTCCAAGCTCAGACTGACAGTAGGAGATCAGGTCCAAGCCCAGACTGACAGTGGGAGTTTGAGTCCAAGCCCAGACTGACAGTAGGAGATCAGGTCCAAGCCCAGACTGACAGTGGGAGTTTGAGTCCAAGCCCAGACTGACAGTGGGAGTTTGAGTCCAAGCCCAGACGGACAGTAGGAGATCAGGTTCAAGCCCAGACTGACAGTAGGAGTTTGAGTCCAAGCCCAGACTGACAGTAGGAGTTCAGGTCCAAGCCCAGACTGGCAGTAGGAGTTTGAGTCCAAGCCCAGACTGGCAGTAAGTGTTCAGGTCCAAGCCCAGACTAACAGTAGGAGTTTGAGTCCAAGCCCAGACTGACAGTAGGAGTTTGATTCCAAGCCCAGACTGACAGTAAGTGTTCAGGTCCAAGCCCAGAATGACAGTAAGAGTTTGAGTCCAAGCCCAGACTGACAGTAGGAGATCAGGTCCAAGCCCAGACTGACAGTAAGTGTTCAGGTCCAAGCCCAGACTGACAGTAGGAGATCAGGTCCAAGCCCAGACAACAGTAGGAGTTTGATTCCAAGCCCAGACTGACAGTAGGAGTTCAGGTCCAAGCCCAGACTGACAGTAAGTGTTCAGGTCCAAGCCCAGACTGACAGTAGGAGTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU345690 False 1910 lncRNA 0.47 4 83307137 83311214
TU345689 True 1504 lncRNA 0.44 2 83308565 83311214

Neighbor

gene id symbol gene type direction distance location
LOC110504940 LOC106586933 coding downstream 113431 82905486 ~ 83193706 (-)
LOC110505453 LOC106586926 coding downstream 559403 82744854 ~ 82747738 (-)
pard3bb LOC106601765 coding downstream 721055 82297732 ~ 82586082 (-)
LOC110520662 des coding downstream 1164056 82105898 ~ 82143081 (-)
LOC118964333 NA coding downstream 1283414 82023279 ~ 82023723 (-)
ttll4 ttll4 coding upstream 172239 83483453 ~ 83539355 (-)
abcb6b LOC106586936 coding upstream 235708 83546922 ~ 83612879 (-)
LOC110520669 LOC106586940 coding upstream 315355 83626569 ~ 83629281 (-)
LOC110505466 LOC106586938 coding upstream 327876 83639090 ~ 83643367 (-)
LOC118964336 NA coding upstream 336117 83646979 ~ 83770550 (-)
G304468 NA non-coding downstream 22560 83284124 ~ 83284577 (-)
G304467 NA non-coding downstream 23199 83283721 ~ 83283938 (-)
G304465 NA non-coding downstream 23864 83282867 ~ 83283273 (-)
G304429 NA non-coding downstream 86148 83200100 ~ 83220989 (-)
G304426 NA non-coding downstream 111122 83195709 ~ 83196015 (-)
G304461 NA non-coding upstream 135 83311349 ~ 83312788 (-)
G304516 NA non-coding upstream 57552 83368766 ~ 83368980 (-)
G304519 NA non-coding upstream 58805 83370019 ~ 83370225 (-)
G304534 NA non-coding upstream 111167 83422381 ~ 83422622 (-)
G304562 NA non-coding upstream 156297 83467511 ~ 83472243 (-)
G304264 NA other downstream 355781 82950069 ~ 82951356 (-)
G304204 LOC107714908 other downstream 455386 82831370 ~ 82851751 (-)
G303665 NA other downstream 1283686 82022829 ~ 82023451 (-)
abi2a LOC106574254 other upstream 644530 83915872 ~ 83986617 (-)
LOC110504983 LOC106586944 other upstream 768807 84072966 ~ 84220262 (-)
G305189 NA other upstream 869837 84181051 ~ 84182035 (-)
si:dkey-230p4.1 LOC106591428 other upstream 970269 84232727 ~ 84301357 (-)
LOC110520676 LOC106562996 other upstream 994090 84305303 ~ 84308440 (-)

Expression


Co-expression Network