G304461


Basic Information

Item Value
gene id G304461
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 83311349 ~ 83312788 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU345687
TTCAATTCTATTTTAAAACCTTAGCCATAACCTTAACCACAATGACAACCTCATACACAACTTTAACCTTAAATTAATATTTTTTgcgatatagccaattttgactttgtggctgtggtaactagtgacaaccatgTGGTTGGTTTGAGAGAGTGGTTCTCTCTCACAGACAGGATAGGTAATACTATGGCCCAGTCccaaaccctattccctatatagtgcactacttttgtccagagccctattccctatatagtgcactactatagaccagagccctattccctatagtagtGCAGTACCTGTGACCAGAGCCTGATAGTgtgctacatagggaatagggtgccattagggccTCATTCTACGTCTCAGCTCCCAGTTCAATCAGGCCTAGAGAGAGAGCTCCAAGGCACTTGGAGAAGAGTCAGAGTTCACCACCTCtaccccttcatcctccatccagtcatccctccaccccactctcttttctcttttttgCTCACTCACTCTCTTTTCGTTTTGCTCCAGGCACAACCAATTCTAAAACTCAACCCAGATTGACTTCAAAACACAAAAATCTGTCTCAGTTAACCTTTTTTCATGGAACATAAAACAGAACAGTTGAGCGAAACTGTTGGGCGAAAGAAAAGCAGAAATGTAGAAAGTAGCACGAGGCCTATTCATCCAAGACCCAGGCGGTTGTACTGTCTCTCTACTCCAGGATAGATGTGGCACTAGCTTCTCCACACATGGCTTTCCTCCAATAACACTTAGCTTAAGGCTCGATTGTGTGTCCAAGAAAGTGGATTGGCTTTTTATCCATCTCCTATAGTCCTTcttcctttgttttgtttgagCTCTTTCTTCtccagggatggagggatggagttaaAAGAGTCTGGAAAGcggagaaagaagagaagagaggagaagattcTCTCTATTCGTTTTTGTCTTGAAAGACACTCCATGATCCCTGTgaactgtatctctctgtctccatgatcCCTGTGAACTATATATCTCTGTCTCCATGATCCCTGTGaactatatctctctgtctccatgatcCCAGTGaactatatctctctgtctccatgatcCCTGTGAactatatctctctatctctctgtctccatgatcCCAGTGaactatatctctctgtctccaagATCCCTGTGaactatatctctctgtctacatGATCCCTGTGaactatatctctctgtctccatgatcCCTGTGAACTATATCTCTCAGTCTCCATGATCCCTGTGAACTATCTCTCTGActccctttctctgtgtctccctcctctctctgtctccctcctctctctgtaaactacatctctgtctccctcctctctcggtctccctcctctctctgtaaactacatctctgtctccctcctctctctgtctccctcctctctctgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU345687 True 1440 lncRNA 0.44 1 83311349 83312788

Neighbor

gene id symbol gene type direction distance location
LOC110504940 LOC106586933 coding downstream 117643 82905486 ~ 83193706 (-)
LOC110505453 LOC106586926 coding downstream 563615 82744854 ~ 82747738 (-)
pard3bb LOC106601765 coding downstream 725267 82297732 ~ 82586082 (-)
LOC110520662 des coding downstream 1168268 82105898 ~ 82143081 (-)
LOC118964333 NA coding downstream 1287626 82023279 ~ 82023723 (-)
ttll4 ttll4 coding upstream 170665 83483453 ~ 83539355 (-)
abcb6b LOC106586936 coding upstream 234134 83546922 ~ 83612879 (-)
LOC110520669 LOC106586940 coding upstream 313781 83626569 ~ 83629281 (-)
LOC110505466 LOC106586938 coding upstream 326302 83639090 ~ 83643367 (-)
LOC118964336 NA coding upstream 334543 83646979 ~ 83770550 (-)
G304463 LOC106586931 non-coding downstream 135 83307137 ~ 83311214 (-)
G304468 NA non-coding downstream 26772 83284124 ~ 83284577 (-)
G304467 NA non-coding downstream 27411 83283721 ~ 83283938 (-)
G304465 NA non-coding downstream 28076 83282867 ~ 83283273 (-)
G304429 NA non-coding downstream 90360 83200100 ~ 83220989 (-)
G304516 NA non-coding upstream 55978 83368766 ~ 83368980 (-)
G304519 NA non-coding upstream 57231 83370019 ~ 83370225 (-)
G304534 NA non-coding upstream 109593 83422381 ~ 83422622 (-)
G304562 NA non-coding upstream 154723 83467511 ~ 83472243 (-)
G304635 NA non-coding upstream 169788 83482576 ~ 83483327 (-)
G304264 NA other downstream 359993 82950069 ~ 82951356 (-)
G304204 LOC107714908 other downstream 459598 82831370 ~ 82851751 (-)
G303665 NA other downstream 1287898 82022829 ~ 82023451 (-)
abi2a LOC106574254 other upstream 642956 83915872 ~ 83986617 (-)
LOC110504983 LOC106586944 other upstream 767233 84072966 ~ 84220262 (-)
G305189 NA other upstream 868263 84181051 ~ 84182035 (-)
si:dkey-230p4.1 LOC106591428 other upstream 968695 84232727 ~ 84301357 (-)
LOC110520676 LOC106562996 other upstream 992516 84305303 ~ 84308440 (-)

Expression


Co-expression Network