G304756


Basic Information

Item Value
gene id G304756
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 83671197 ~ 83717103 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU346046
gtcccagacctataacacaaccatactatcctagcctggtcccagatctaaaacatctctaacagaaccatactatcttagcctggtcccagatctataacacaaccagacaattctagcctggtcccagatctaaaacatctctaacagaaccatactatcttagcctggtcccagacctataacacaaccatactatcctagcctggtcccagatctaaaacatctctaacacaaccatactatcctagcctggtcccagatctataacagaaccatactatcttagcctggtcccagatctaaaacatctgtaacagaaccatactatcctagcctggtcccagatctctaacagaaccatactatcttagcctggtcccagatctctaacagaaccatactatcctagcctggtcccagatctatatcactaacagaaccatactatcttagcctggtcccagatctataacacaaccagactatcctagcctggtcccagatctataacatctctaacagaaccatactatcctagcctggtcccagatctataacggaaccatactatcttagcctggtcccagacctatatcacaaccagactatcctagcctggtcccagatctaaaacatctctaacagaaccatactatcttagcctggtcccagacctataacacaaccatactatcctagcctggtcccagatctaaaacatctctaacagaaccatactatcttagcctggtcccagatctataacacaaccagacaattctagcctagtcccagatctaaaacatctctaacagaaccatactatcttagcctggtcccagatctaaaacatctctaacagaaccacactatcttagcctggtccatgatctaaaacatctgtaacagaaccatactatcctagcctggtcccagatctctaacagaaccatactatcctagcctggtcccagatctataacatctgtaacagaaccatactatcctagcctggtcccagatctctaacagaaccatactatcttagcctggtcgcagatctataacacaaccagactatcctagcctggtcccagatctataacagaaccatactatcctagcctggtcccagacctataacagaaccatactatcctagcctggtcccagacctataacagaaccagactatcttagcctggtcccagatctctaacagaaccatactatcctagcctggtcccagatctacatcactaacagaaccatactatcctagcctggtcccagatctataacagaaccatactatcctagcctcgtctcagatctctaacagaaccatactatcttagcctggtcccagatctaaaacatctctaacagaaccatactatcttagcctggtccatgatctaaaacatctGTAACAGAACCATAccatcctagcctggtcccagatctataacatct
>TU346043
ataacacaaccatactatcatagcctggtcccagatctataacagaaccatactatcctagcctggtcccagatctataacacaaccatactatcctagcctggtccatgatctaaaacatctctaacagaaccatactatcttagcctggtcccagatctaaaacatctctaacagaaccatactatcttagcctggtcccagacctataacacaaccatactatcctagcctggtccatgatctaaaacatctctaacagaaccatactatcctagcctggtcccagatctataacagaaccatactatcctagccttgtcccagatctataacagaaccatactatcctagcctggtccccgACCtacaacagaaccatactatcctagcctggtcccagatcaataacagaaccatactatcctagcctggtcccagatctaaaaca
>TU346045
gtcccagacctataacacaaccatactatcctagcctggtcccagatctaaaacatctctaacagaaccatactatcttagcctggtcccagatctataacacaaccagacaattctagcctggtcccagatctaaaacatctctaacagaaccatactatcttagcctggtcccagacctataacacaaccatactatcctagcctggtcccagatctaaaacatctctaacacaaccatactatcctagcctggtcccagatctataacagaaccatactatcttagcctggtcccagatctaaaacatctgtaacagaaccatactatcctagcctggtcccagatctctaacagaaccatactatcttagcctggtcccagatctctaacagaaccatactatcctagcctggtcccagatctatatcactaacagaaccatactatcttagcctggtcccagatctataacacaaccagactatcctagcctggtcccagatctataacatctctaacagaaccatactatcctagcctggtcccagatctataacggaaccatactatcttagcctggtcccagacctatatcacaaccagactatcctagcctggtcccagatctaaaacatctctaacagaaccatactatcttagcctggtcccagacctataacacaaccatactatcctagcctggtcccagatctaaaacatctctaacagaaccatactatcttagcctggtcccagatctataacacaaccagacaattctagcctagtcccagatctaaaacatctctaacagaaccatactatcttagcctggtcccagatctaaaacatctctaacagaaccacactatcttagcctggtccatgatctaaaacatctgtaacagaaccatactatcctagcctggtcccagatctctaacagaaccatactatcctagcctggtcccagatctataacatctgtaacagaaccatactatcctagcctggtcccagatctctaacagaaccatactatcttagcctggtcgcagatctataacacaaccagactatcctagcctggtcccagatctataacagaaccatactatcctagcctggtcccagacctataacagaaccatactatcctagcctggtcccagacctataacagaaccagactatcttagcctggtcccagatctaaaacatctctaacacaaccatactatcctagcctggtcccagatctataacacaaccatactatcctagcctggtccatgaTATAAATCAGAacaatactatcctagcctggtcccagatctataacagacccatagtatcttagcctggtcccagatctataacacaaccagactttcctagcctggtcccagatctataacagacccatagtatcttagcctggtcccagatctataacacaaccagactttcctagcctggtcccagatctataacacaaccagactatcctagcctggtcccagaactATAACATCTCTAACAGACCCAtagtatcttagcctggtcccagatctataacacaaccagactatcctagcctggtcccagatctaaaacatctctaacagaaccataaactatcctagcctggtcccagaccaataacagaaccatactatcctagcctggtcccagatctaaaaca

Function

NR:

description
PREDICTED: proline-rich protein 2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU346046 False 1479 lncRNA 0.44 3 83671197 83688895
TU346043 False 451 lncRNA 0.43 2 83682035 83717103
TU346045 True 1709 lncRNA 0.44 2 83682035 83688895

Neighbor

gene id symbol gene type direction distance location
LOC110505466 LOC106586938 coding downstream 27830 83639090 ~ 83643367 (-)
LOC110520669 LOC106586940 coding downstream 41916 83626569 ~ 83629281 (-)
abcb6b LOC106586936 coding downstream 58318 83546922 ~ 83612879 (-)
ttll4 ttll4 coding downstream 131842 83483453 ~ 83539355 (-)
LOC110504940 LOC106586933 coding downstream 477491 82905486 ~ 83193706 (-)
abi2a LOC106574254 coding upstream 198769 83915872 ~ 83986617 (-)
LOC110504983 LOC106586944 coding upstream 356835 84072966 ~ 84220262 (-)
si:dkey-230p4.1 LOC106591428 coding upstream 515624 84232727 ~ 84301357 (-)
LOC110520676 LOC106562996 coding upstream 588200 84305303 ~ 84308440 (-)
LOC110516739 LOC100708085 coding upstream 595612 84312715 ~ 84624269 (-)
LOC118964336 NA non-coding downstream 4143 83646979 ~ 83770550 (-)
G304763 NA non-coding downstream 25659 83645109 ~ 83645538 (-)
G304762 NA non-coding downstream 26392 83644492 ~ 83644805 (-)
G304754 NA non-coding downstream 26750 83643371 ~ 83644447 (-)
G304701 NA non-coding downstream 38102 83632791 ~ 83633095 (-)
G304791 NA non-coding upstream 17542 83734645 ~ 83750749 (-)
G304896 NA non-coding upstream 147985 83865088 ~ 83866045 (-)
G304913 NA non-coding upstream 176248 83893351 ~ 83898110 (-)
G304924 NA non-coding upstream 189526 83906629 ~ 83906828 (-)
G305058 NA non-coding upstream 203000 83920103 ~ 83920305 (-)
G304264 NA other downstream 719841 82950069 ~ 82951356 (-)
G304204 LOC107714908 other downstream 819446 82831370 ~ 82851751 (-)
LOC110505453 LOC106586926 other downstream 923459 82744854 ~ 82747738 (-)
pard3bb LOC106601765 other downstream 1357116 82297732 ~ 82586082 (-)
G303665 NA other downstream 1647746 82022829 ~ 82023451 (-)
G305189 NA other upstream 463948 84181051 ~ 84182035 (-)

Expression


Co-expression Network