G305079



Basic Information


Item Value
gene id G305079
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 83945477 ~ 83946041 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU346447
gtagattacatttaaatgtcgttgatgtgaggtactgtagattacatttaaatgtcgttgatgtgaggtactgtagattacatttaaaggttgttgatgtgaggtactgtagattacatgtaggttgttgatgtgaggtactgtagattacatttatatcgttgatgtgaggtactgtagattacatttaaaggttgttgatgtgaggtactgtagattacatgtaggttgttgatgtgaggtactgtagatgtcGAGGCAACAGTGGGCTCTGTTGCTATAGGCAGCATAGAAAGGACAACGATCAGTCATACACCACAGAtacactggagctgttatctagcagtcagatacactggagctgttatctagcagtcagatacactgga

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU346447 True 389 lncRNA 0.39 2 83945477 83946041

Neighbor


gene id symbol gene type direction distance location
LOC118964336 NA coding downstream 174927 83646979 ~ 83770550 (-)
LOC110505466 LOC106586938 coding downstream 302110 83639090 ~ 83643367 (-)
LOC110520669 LOC106586940 coding downstream 316196 83626569 ~ 83629281 (-)
abcb6b LOC106586936 coding downstream 332598 83546922 ~ 83612879 (-)
ttll4 ttll4 coding downstream 406122 83483453 ~ 83539355 (-)
LOC110504983 LOC106586944 coding upstream 127897 84072966 ~ 84220262 (-)
si:dkey-230p4.1 LOC106591428 coding upstream 286686 84232727 ~ 84301357 (-)
LOC110520676 LOC106562996 coding upstream 359262 84305303 ~ 84308440 (-)
LOC110516739 LOC100708085 coding upstream 366674 84312715 ~ 84624269 (-)
xrcc5 LOC106586961 coding upstream 890834 84836875 ~ 84868307 (-)
G305076 NA non-coding downstream 4871 83939545 ~ 83940606 (-)
G305077 NA non-coding downstream 5101 83939750 ~ 83940376 (-)
G305075 NA non-coding downstream 7093 83938100 ~ 83938384 (-)
G305072 NA non-coding downstream 9409 83935856 ~ 83936068 (-)
G305070 NA non-coding downstream 12122 83933134 ~ 83933355 (-)
G305103 NA non-coding upstream 61803 84007844 ~ 84008112 (-)
G305104 NA non-coding upstream 62827 84008868 ~ 84009068 (-)
G305106 NA non-coding upstream 65791 84011832 ~ 84012038 (-)
G305107 NA non-coding upstream 66133 84012174 ~ 84012418 (-)
G305108 NA non-coding upstream 66604 84012645 ~ 84013173 (-)
G304264 NA other downstream 994121 82950069 ~ 82951356 (-)
G304204 LOC107714908 other downstream 1093726 82831370 ~ 82851751 (-)
LOC110505453 LOC106586926 other downstream 1197739 82744854 ~ 82747738 (-)
pard3bb LOC106601765 other downstream 1631396 82297732 ~ 82586082 (-)
G303665 NA other downstream 1922026 82022829 ~ 82023451 (-)
abi2a LOC106574254 other upstream 9703 83915872 ~ 83986617 (-)
G305189 NA other upstream 235010 84181051 ~ 84182035 (-)

Expression



Co-expression Network