G305109



Basic Information


Item Value
gene id G305109
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 84013493 ~ 84014257 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU346484
accctaaccaccatactaccatactaccctaaccaccataccaccatactaccctaaccaccatactaccatactaccatattaccctaaccaccatactaccctaaccaccatactaccatactaccatactaccatactaccatattaccctaaccaccatactaccctaaccaccatactaccataactaccatactaccctaaccaccatactaccctaaccaccttactaccctaaccaccatactaccatactaccctaaccaccatactaccctaaccaccatactaccctaaccaccatactaccctaaccaccatactaccatactaccctaaccaccatactaccctaactACCATACTACCTTAACCACCATATCACcttactaccctaaccaccatactaccctaaccaccatactagcatactaccctaaccaccatactaccctaactACAATACCAACATACTACCCcaaccaccatactaccatactaccattctaccctaaccaccatactaccctaaccaccatactactatactaccctaaccaccatactaccatactaccctaaccaccatactaccctaaccaccatactaccctaaccgcCATAtcaccatactaccctaaccaccatactac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU346484 True 656 lncRNA 0.44 2 84013493 84014257

Neighbor


gene id symbol gene type direction distance location
abi2a LOC106574254 coding downstream 26876 83915872 ~ 83986617 (-)
LOC118964336 NA coding downstream 242943 83646979 ~ 83770550 (-)
LOC110505466 LOC106586938 coding downstream 370126 83639090 ~ 83643367 (-)
LOC110520669 LOC106586940 coding downstream 384212 83626569 ~ 83629281 (-)
abcb6b LOC106586936 coding downstream 400614 83546922 ~ 83612879 (-)
LOC110504983 LOC106586944 coding upstream 59681 84072966 ~ 84220262 (-)
si:dkey-230p4.1 LOC106591428 coding upstream 218470 84232727 ~ 84301357 (-)
LOC110520676 LOC106562996 coding upstream 291046 84305303 ~ 84308440 (-)
LOC110516739 LOC100708085 coding upstream 298458 84312715 ~ 84624269 (-)
xrcc5 LOC106586961 coding upstream 822618 84836875 ~ 84868307 (-)
G305108 NA non-coding downstream 320 84012645 ~ 84013173 (-)
G305107 NA non-coding downstream 1075 84012174 ~ 84012418 (-)
G305106 NA non-coding downstream 1455 84011832 ~ 84012038 (-)
G305104 NA non-coding downstream 4425 84008868 ~ 84009068 (-)
G305103 NA non-coding downstream 5381 84007844 ~ 84008112 (-)
G305114 NA non-coding upstream 11170 84025427 ~ 84025904 (-)
G305130 NA non-coding upstream 51856 84066113 ~ 84066664 (-)
G305135 NA non-coding upstream 55062 84069319 ~ 84069595 (-)
G305136 NA non-coding upstream 55349 84069606 ~ 84069836 (-)
G305140 NA non-coding upstream 58014 84072271 ~ 84072519 (-)
G304264 NA other downstream 1062137 82950069 ~ 82951356 (-)
G304204 LOC107714908 other downstream 1161742 82831370 ~ 82851751 (-)
LOC110505453 LOC106586926 other downstream 1265755 82744854 ~ 82747738 (-)
pard3bb LOC106601765 other downstream 1699412 82297732 ~ 82586082 (-)
G305189 NA other upstream 166794 84181051 ~ 84182035 (-)

Expression



Co-expression Network