Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110521984 |
| gene name | LOC106607649 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 5113893 ~ 5120870 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | name | namespace |
|---|---|---|
| GO:0038166 | angiotensin-activated signaling pathway | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004945 | angiotensin type II receptor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021600007.2 | False | 2857 | mRNA | 0.46 | 2 | 5113893 | 5120870 |
| TU354474 | False | 758 | lncRNA | 0.35 | 1 | 5114007 | 5114764 |
| TU354475 | True | 178 | lncRNA | 0.48 | 1 | 5115236 | 5115413 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110521982 | LOC106607651 | coding | downstream | 88903 | 5009876 ~ 5024990 (-) |
| LOC110521981 | LOC106607650 | coding | downstream | 104636 | 4933975 ~ 5009257 (-) |
| LOC110521979 | LOC106607652 | coding | downstream | 268224 | 4810320 ~ 4845669 (-) |
| LOC110521974 | LOC106600520 | coding | downstream | 720066 | 4370102 ~ 4393827 (-) |
| LOC110521976 | NA | coding | downstream | 760174 | 4346770 ~ 4353719 (-) |
| LOC110521031 | LOC106607646 | coding | upstream | 82455 | 5203325 ~ 5336821 (-) |
| LOC110521989 | LOC106607642 | coding | upstream | 438065 | 5558935 ~ 5580102 (-) |
| LOC118964391 | NA | coding | upstream | 465378 | 5586248 ~ 5587296 (-) |
| LOC110521991 | LOC106607640 | coding | upstream | 653069 | 5773939 ~ 5778108 (-) |
| LOC110521996 | LOC106607551 | coding | upstream | 1072406 | 6193276 ~ 6200262 (-) |
| G312470 | NA | non-coding | downstream | 2028 | 5111628 ~ 5111865 (-) |
| G312448 | NA | non-coding | downstream | 66262 | 5047376 ~ 5047631 (-) |
| G312438 | NA | non-coding | downstream | 74232 | 5039452 ~ 5039661 (-) |
| G312430 | NA | non-coding | downstream | 78120 | 5035290 ~ 5035773 (-) |
| G312420 | NA | non-coding | downstream | 85362 | 5028256 ~ 5028531 (-) |
| G312486 | NA | non-coding | upstream | 7193 | 5128063 ~ 5128276 (-) |
| G312492 | NA | non-coding | upstream | 9993 | 5130863 ~ 5131180 (-) |
| G312510 | NA | non-coding | upstream | 24509 | 5145379 ~ 5145608 (-) |
| G312511 | NA | non-coding | upstream | 24925 | 5145795 ~ 5146026 (-) |
| G312528 | NA | non-coding | upstream | 37320 | 5158190 ~ 5158479 (-) |
| G311859 | NA | other | downstream | 890582 | 4190120 ~ 4223311 (-) |
| LOC118964401 | LOC106591690 | other | downstream | 915932 | 4193595 ~ 4197990 (-) |
| G311694 | NA | other | downstream | 1183837 | 3929720 ~ 3930056 (-) |
| G308195 | NA | other | downstream | 3430854 | 1680178 ~ 1683039 (-) |
| G314127 | NA | other | upstream | 1363456 | 6484326 ~ 6491453 (-) |
| LOC110522000 | LOC106607553 | other | upstream | 1476702 | 6590264 ~ 6599823 (-) |
| LOC110521035 | LOC106607558 | other | upstream | 1777277 | 6871876 ~ 6970539 (-) |
| G314912 | LOC106607559 | other | upstream | 2068661 | 7189531 ~ 7189910 (-) |
| G315249 | LOC106607562 | other | upstream | 2298969 | 7419839 ~ 7431757 (-) |
