LOC110521989 (LOC106607642)


Basic Information

Item Value
gene id LOC110521989
gene name LOC106607642
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 5558935 ~ 5580102 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600020.2
GCGTTATTCCCATTTCCAATAGGATGAATGAACTTTAAATAGTATCCAATCAGATGAGAGCTCCTCTGGCATATAAAAACCTAGCGAAGCTGATTCATTCCGGACACCATTATTAGTTTTGGTGTGTCTTTCCCAAAGAAAAACGTCCTACGGTGAACGCAGTCATGCCTTTCGGTAACACCCACAACAAGCTGAAGATGAGCTACTCCGCGGAGCAGGAGTACCCCGACCTCAGCCAACATAACAACCACATGGCCAAGGTGCTCACCCCAGAGATGTACGCCAACCTGCGGGACAAAGAGACTCCAAGTGGATTTACCGTGGATGATGTCATTCAAACTGGAATTGATAACCCAGGCCACCCCTTCATCATGACAGTGGGCTGTGTGGCCGGAGACGAGGAGACGTACGAGGTGTTCAAGGAGCTGCTGGACCCCATCATTGAAGACCGCCACGGCGGATACAAGCCCTCAGACAAACACAAGACCGACCTGAACCCAGATAACCTTGTGGGTGGGGATGACCTGGACCCCAACTTCGTCCTGAGCTCCAGAGTGCGAACTGGCAGGAGTGTCCGCGGCTTCTGCCTCCCCCCACACTGCAGCCGTGGGGAGCGACGTGCCATTGAGAACATGGCAATCGAAAGTCTAGCCTCACTGGATGGGGACCTCAATGGCCAGTATTACGCCCTGAAGAACATGACAGATGATGAGCAGCAACAGCTGATCGACGACCACTTCCTGTTTGACAAGCCCGTGTCCCCCCTGCTGTTGGCGTCCGGGATGGGCCGTGACTGGCCTGACGGCAGGGGCATCTGGCACAATGATGGCAAGACCTTCCTGGTCTGGGTGAATGAGGAGGACCATCTGCGGGTCATCTCTATGCAGAAGGGCGGCAATATGAAGGAGGTGTTCCACCGCTTCTGCACAGGCCTcacgaagATTGAGAGCCTGTTCAAGGACAAGGGCCATGAGTTCATGTGGAACGAGCACCTGGGCTACGTGCTCACCTGCCCCTCCAACCTGGGCACGGGGCTGCGCGCCGGTGTGCACGTCAAGCTGCCCAACATGAGCAAGCACGAGAAGTTCAGCGAGGTCCTCAAGAGGTTGAGGCTGCAGAAGCGTGGCACAGgtggTGTGGACACTGCAGCAGTAGGCGGTGTCTTCGACATCTCCAACGCAGACCGTCTGGGCTTCTCCGAGGTGGAGCTGGTGCAGATGGTTGTCGACGGCGTCAAGACCCTCGTCGAGATGGAGAAGCGTCTGGAGAGCGGCCAGTCCTTCAACGACCTGATGCCCGACCAGAAGTGAACACACTCTCTCAAACCTTCTAACCTCTTACCTCGTCACCAATATCTCCCCCTTGTCTCCATAAACAATCTTCACTACATCAAGAAAATGCACTCTGCCCGACACGTTTAGTGGCACAAGTTAGATGAGTTCATCTGTGTGATGAAGGATTTTGTATCAAATGCAATCTTTTTGCAGATGGCTATTAACACCTGAAATAAAAGTATCTTTGGCCCATGGAA
>XM_036975520.1
GCGTTATTCCCATTTCCAATAGGATGAATGAACTTTAAATAGTATCCAATCAGATGAGAGCTCCTCTGGCATATAAAAACCTAGCGAAGCTGATTCATTCCGGACACCATTATTAGTTTTGGTGTGTCTTTCCCAAAGAAAAACGTCCTACGGTGAACGCAGTCATGCCTTTCGGTAACACCCACAACAAGCTGAAGATGAGCTACTCCGCGGAGCAGGAGTACCCCGACCTCAGCCAACATAACAACCACATGGCCAAGGTGCTCACCCCAGAGATGTACGCCAACCTGCGGGACAAAGAGACTCCAAGTGGATTTACCGTGGATGATGTCATTCAAACTGGAATTGATAACCCAGGCCACCCCTTCATCATGACAGTGGGCTGTGTGGCCGGAGACGAGGAGACGTACGAGGTGTTCAAGGAGCTGCTGGACCCCATCATTGAAGACCGCCACGGCGGATACAAGCCCTCAGACAAACACAAGACCGACCTGAACCCAGATAACCTTGTGGGTGGGGATGACCTGGACCCCAACTTCGTCCTGAGCTCCAGAGTGCGAACTGGCAGGAGTGTCCGCGGCTTCTGCCTCCCCCCACACTGCAGCCGTGGGGAGCGACGTGCCATTGAGAACATGGCAATCGAAAGTCTAGCCTCACTGGATGGGGACCTCAATGGCCAGTATTACGCCCTGAAGAACATGACAGATGATGAGCAGCAACAGCTGATCGACGACCACTTCCTGTTTGACAAGCCCGTGTCCCCCCTGCTGTTGGCGTCCGGGATGGGCCGTGACTGGCCTGACGGCAGGGGCATCTGGCACAATGATGGCAAGACCTTCCTGGTCTGGGTGAATGAGGAGGACCATCTGCGGGTCATCTCTATGCAGAAGGGCGGCAATATGAAGGAGGTGTTCCACCGCTTCTGCACAGGCCTcacgaagATTGAGAGCCTGTTCAAGGACAAGGGCCATGAGTTCATGTGGAACGAGCACCTGGGCTACGTGCTCACCTGCCCCTCCAACCTGGGCACGGGGCTGCGCGCCGGTGTGCACGTCAAGCTGCCCAACATGAGCAAGCACGAGAAGTTCAGCGAGGTCCTCAAGAGGTTGAGGCTGCAGAAGCGTGGCACAGgtggTGTGGACACTGCAGCAGTAGGCGGTGTCTTCGACATCTCCAACGCAGACCGTCTGGGCTTCTCCGAGGTGGAGCTGGTGCAGATGGTTGTCGACGGCGTCAAGACCCTCGTCGAGATGGAGAAGCGTCTGGAGAGCGGCCAGTCCTTCAACGACCTGATGCCCGACCAGAAGTGAACACACTCTCTCAAACCTTCTAACCTCTTACCTCGTCACCAATATCTCCCCCTTGTCTCCATAAACAATCTTCACTACATCAAGAAAATGCACTCTGCCCGACACGTTTAGTGGCACAAGTTAGATGAGTTCATCTGTGTGATGAAGGATTTTGTATCAAATGCAATCTTTTTGCAGATGGCTATTAACACCTGAAATAAAAGTATCTTTGGCCCATGGAA

Function

NR:

description
creatine kinase B-type

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K00933 E2.7.3.2; creatine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600020.2 False 1531 mRNA 0.54 8 5558935 5572913
XM_036975520.1 True 1531 mRNA 0.54 9 5558935 5580102
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110521031 LOC106607646 coding downstream 222114 5203325 ~ 5336821 (-)
LOC110521984 LOC106607649 coding downstream 438065 5113893 ~ 5120870 (-)
LOC110521982 LOC106607651 coding downstream 533945 5009876 ~ 5024990 (-)
LOC110521981 LOC106607650 coding downstream 549678 4933975 ~ 5009257 (-)
LOC110521979 LOC106607652 coding downstream 713266 4810320 ~ 4845669 (-)
LOC118964391 NA coding upstream 6146 5586248 ~ 5587296 (-)
LOC110521991 LOC106607640 coding upstream 193837 5773939 ~ 5778108 (-)
LOC110521996 LOC106607551 coding upstream 613174 6193276 ~ 6200262 (-)
LOC110521999 LOC106587059 coding upstream 939960 6520062 ~ 6524760 (-)
LOC110522001 LOC106607554 coding upstream 993267 6573369 ~ 6587979 (-)
G312932 NA non-coding downstream 15173 5466870 ~ 5543762 (-)
G312964 NA non-coding downstream 61549 5496630 ~ 5497386 (-)
G312956 NA non-coding downstream 66820 5491302 ~ 5492115 (-)
G312881 NA non-coding downstream 150429 5408074 ~ 5408506 (-)
G312869 NA non-coding downstream 180292 5377867 ~ 5378643 (-)
G313022 NA non-coding upstream 31319 5611421 ~ 5611730 (-)
G313029 NA non-coding upstream 38108 5618210 ~ 5618426 (-)
G313049 NA non-coding upstream 53216 5633318 ~ 5633567 (-)
G313055 NA non-coding upstream 55738 5635840 ~ 5636045 (-)
G313059 NA non-coding upstream 58722 5638824 ~ 5639076 (-)
G311859 NA other downstream 1335624 4190120 ~ 4223311 (-)
LOC118964401 LOC106591690 other downstream 1360974 4193595 ~ 4197990 (-)
G311694 NA other downstream 1628879 3929720 ~ 3930056 (-)
G308195 NA other downstream 3875896 1680178 ~ 1683039 (-)
G314127 NA other upstream 904224 6484326 ~ 6491453 (-)
LOC110522000 LOC106607553 other upstream 1017470 6590264 ~ 6599823 (-)
LOC110521035 LOC106607558 other upstream 1318045 6871876 ~ 6970539 (-)
G314912 LOC106607559 other upstream 1609429 7189531 ~ 7189910 (-)
G315249 LOC106607562 other upstream 1839737 7419839 ~ 7431757 (-)

Expression

LOC110521989(LOC106607642) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 200.
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LOC110521989(LOC106607642) Expression in each Bioproject

Bar chart with 20 bars.
LOC110521989(LOC106607642) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 7500.
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Co-expression Network