XLOC_022416


Basic Information

Item Value
gene id XLOC_022416
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 27770481 ~ 27772372 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045025
ccttGCTGTTCACACAGTATGGATGATAACACTGTGCACACTGAGCACATGCTAGGAGCTGGCCCTCCACACCCTGTCCAAAACTACCACAAACTACACACATGTCCtgttgcacGACAAACTTATCAGTGTTGGAGAAAAGTACCACAGTATTTTGCATGGTGTCATCTTCCTCCTCATCTTCCTCTTTGCTAATTCCAGAGGGTCCTGAGTGTCCTCTGGTTTTTGCTCAACAGCCTCTGCAACCACCGTTTCACTGGTAGTTTCATCTTCTTTTTGCTTTGCATCAACATC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045025 True 294 lncRNA 0.46 3 27770481 27772372

Neighbor

gene id symbol gene type direction distance location
XLOC_022415 NA coding downstream 41027 27727295 ~ 27729454 (-)
XLOC_022414 dnajc22 coding downstream 67920 27696694 ~ 27702561 (-)
XLOC_022413 ikzf4 coding downstream 75308 27683014 ~ 27695173 (-)
XLOC_022412 NA coding downstream 95087 27652896 ~ 27675394 (-)
XLOC_022411 wnt10b coding downstream 122712 27641471 ~ 27647769 (-)
XLOC_022417 NA coding upstream 15997 27788369 ~ 27795923 (-)
XLOC_022418 acvr1ba coding upstream 28147 27800519 ~ 27822920 (-)
XLOC_022419 acvrl1 coding upstream 63275 27835647 ~ 27857104 (-)
XLOC_022420 ankrd33aa coding upstream 90435 27862807 ~ 27875140 (-)
XLOC_022421 sp5l coding upstream 250719 28023091 ~ 28025943 (-)
XLOC_022408 CR354381.1 non-coding downstream 190189 27580164 ~ 27580292 (-)
XLOC_022400 NA non-coding downstream 571386 27191956 ~ 27199095 (-)
XLOC_022396 NA non-coding downstream 755321 26961010 ~ 27015160 (-)
XLOC_022427 NA non-coding upstream 660803 28433175 ~ 28453703 (-)
XLOC_022432 CR677617.1 non-coding upstream 1413480 29185852 ~ 29257716 (-)
XLOC_022433 NA non-coding upstream 1561481 29333853 ~ 29358214 (-)
XLOC_022440 NA non-coding upstream 1902623 29674995 ~ 29706359 (-)

Expression


Co-expression Network