LOC110522127 (LOC106607724)


Basic Information

Item Value
gene id LOC110522127
gene name LOC106607724
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 13809748 ~ 13821911 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600258.2
GAGACTGTCAGTTAACCAGTATACGGACAGTGATCGTAGTTCGTAACAGAGATGGAATATTATACCGTGAACCCGGAATAGTGGAAGACGAAATTATCATTCTCAGGATAACAGAAAGATGAGGGTTGGAAAGAAAATGAAATGACTGACAATCAAATTGTTTAATGCCTCTTTGAGTCATGATTTTGTCTTGTAAACCAATCTAGCGGTGTTTTCTTTTTGTCGGAGAACCCATTCCCTGCAAAACAAAGGCAGAATGATACGCGGAACTACATTTTACTTACCGCTTTTGTTGAATTGTGTAGGTGGCATTGCCCGTGTTTCGCACTGTAAATAATGTTATTTGATTAGATGTATTAATTCACGTGCAATGAGagattaatacagtatatctagtTGTGACTTCGAGGAATTACAAAAAGCATCTGGACAGCGAATTGGATCAACTGAAAGACTGAAATGAGCCGCGAGCAATTGTCTGTCTACTGAAACCCAACGATGTCAACCTGACTTTGGAAGGAAAACGGATCTCTCCTCCATGCTAAGATGCTGGGTTCTTCAGTTGGACTAAGAACAGCATCTAAGGCATCATGTTTGGCAAGAGAAGAGCTCCAGTAACGATGCCTAAACCCGAGCCTGCACCCCCCGTGGAAGAATGGTTTACTCCACTGTCGTTCCCCCTGTGGAGGCAGGGGAGACCAATAAAGCCAGCCTCTGCTGCCTCGTCACGGCAGGGCTGCTGAACCTGTCTGACCACCTCCTCCACGTCCAGCCTGACACGGAAGACATGTCCATGGAAAACAGCTCATATGGCTCCTCCTTTTCACCTCTGGACCTGGACACAGTCACGCGAACAGCCGAGACCCAGGGGAGTGTTCAgggtgtcagcctgcccctccaGGTGTTCTTCTGCATGGCCATGGTCTCCATCCTGTTGGTGGCCTTCCTAGGGAACGTGGTGGTGGTCCTGATGGTCTACCAGCGCGCCGCCATGCGATCCGCCATCAACATCCTGTTGGCCAGCCTGGCCTTCGCAGACATGATGCTGGCCGTCCTGAACATGCCCTTTGCCCTGGTTACTGTGGTGACCACACGCTGGATCTTCGGGGATGTCTTCTGCCGAGTGTCGGCCATGTTCTTCTGGCTTTTTGTCATAGAGGGCATGGTCATCCTGCTTATAATAAGCATAGATCGATTCCTGATCATAGTCCAGAAACAGGACAAATTGAGTCCCCACAGAGCCAAAGTGCTCATAGTCATCGCTTGGACTGTCTCCTTATGTTTCTCTTTCCCACTAGCCATAGGCCACCCATCACTCCAGATCCCCTCTAGAGCTCCACAGTGTGTGTTCGGCTACACCAGCGAGCCGGGCTACCACGCCTACGCGTTGCTCCTCATGCTGGCCTTCTTTTTCATCCCCTTCTTGGTCATGCTGTACACCTTCATGGGGATCCTGAACACCATACGGCATAACGCCGTGCGCATCcacagccacccggacagcatCTGTCTGAGTCAGGCCAGCAAGCTGGGCCTCATGAGCCTGCAGAGGCCCTTTGAGATGAACATAGACATGAGCTTCAAGACGCGTGCCTTCACTACCATCCTCATTCTCTTCTCGGTGTTCACCGTGTGCTGGGCGCCCTTCACCGCCTACAGCCTAGTTTCCACCTTCAGCAGCCCCTTCTACCACAAGGACAACTTCTTTGAAGTCAGCACCTGGTTCCTTTTGTTGTGCTATCTCAAGTCGGCCCTCAACCCTCTCATTTACTACTGGCGGATCAAGAAGTTCCGCGACGCCTGCCTTGACCTGATGCCCAAGTATTTCAAGTTTCTTCCTCAGCTGCCCGGCCACACAAAGCGACGTATCCGACCCAGCGCTGTGTACGTGTGTGGGGAGCATCGCTCTGTGGTCTAATAACACTGGACTGACTTGGAGGACACTGACTTCACTGCCATGTAGGTTTTGTTTGACCACTTATCCAATTTGTTCTCGCCAGTCAAATGAATGAGTTGAGACTGCGGTTTCGACAGTATATTTTAGCTGAGTAGAAtctgtttacaaagcatgtcaATTAACTGCTTCAGTGGTTTTGAATATGGTCATAAGGCCACCAAGATTACATTTTGTCATTGATATTTCTATGTAATTGTTTTGTGCCTATTAGTTAGTCTATACCAGTCATAATGCTGCTACATCTGGTGATTTCAGTGTACTGTACTTGAATCTAATAAACATTTTTAACATTT

Function

NR:

description
probable G-protein coupled receptor 63

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04321 GPR63; G protein-coupled receptor 63

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600258.2 True 2250 mRNA 0.49 2 13809748 13821911

Neighbor

gene id symbol gene type direction distance location
LOC110522125 epha7 coding downstream 162481 13572893 ~ 13647267 (-)
LOC110522122 map3k7 coding downstream 612513 13173776 ~ 13197235 (-)
LOC110522120 bach2 coding downstream 658748 13052105 ~ 13151000 (-)
LOC110522101 mdn1 coding downstream 775651 12982926 ~ 13034097 (-)
lyrm2 lyrm2 coding downstream 826979 12981284 ~ 12982769 (-)
LOC110522128 LOC106607726 coding upstream 3889 13825800 ~ 13827498 (-)
dse LOC106607725 coding upstream 7145 13829056 ~ 13858174 (-)
LOC110522132 LOC106607728 coding upstream 36273 13858184 ~ 13916995 (-)
LOC110522135 prs27 coding upstream 316805 14138716 ~ 14153769 (-)
LOC110522136 prs27 coding upstream 343221 14165132 ~ 14174146 (-)
G322732 LOC106607723 non-coding downstream 10125 13799249 ~ 13799623 (-)
G322580 NA non-coding downstream 73569 13735968 ~ 13736179 (-)
G322563 NA non-coding downstream 86616 13722888 ~ 13723132 (-)
G322423 NA non-coding downstream 236858 13572159 ~ 13572890 (-)
G322733 NA non-coding upstream 1915 13823826 ~ 13871569 (-)
G322832 LOC107661334 non-coding upstream 111512 13933423 ~ 13933691 (-)
G322833 NA non-coding upstream 113446 13935357 ~ 13935572 (-)
G322850 NA non-coding upstream 133029 13954940 ~ 13955642 (-)
G322882 NA non-coding upstream 168221 13990132 ~ 13990412 (-)
LOC110522115 LOC106571283 other downstream 1262231 12545954 ~ 12547517 (-)
G320883 NA other downstream 1491350 12318003 ~ 12318398 (-)
LOC110522088 LOC106607688 other downstream 1916175 11891326 ~ 11893699 (-)
G323167 prs27 other upstream 306578 14128489 ~ 14187171 (-)
G324432 NA other upstream 1431953 15253864 ~ 15255008 (-)
rnf217 rnf217 other upstream 2197517 16019428 ~ 16125180 (-)
G325696 NA other upstream 2517421 16339332 ~ 16340707 (-)
G325960 LOC106607776 other upstream 2824844 16646755 ~ 16662881 (-)

Expression


Co-expression Network