dse (LOC106607725)


Basic Information

Item Value
gene id dse
gene name LOC106607725
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 13829056 ~ 13858174 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036975679.1
CAGCGCCCGCTGGAACGAGGTGTATGGAAACAACCTGGGAGTGTTGTCTATGTTCTGTCTGCTCTACCCACACAGGGCCGGGGCCCTCAACCTGGCCAAGGATTACATGGAGAGGATGGCAGCTCAGCCTAGTTGGTAAAGGATGCTCCCTGGGATGAGGTTCCTCTAGCCCACTCTCTGGTTGGCTTCGCCACAGCGTATGATTTCCTGTATGAGTACCTGAGCAAGGTGCAGCAGGAGCGCTTCCTGCAGGTGATCGGCAACGCTACACGCTACATGTATGAGAAGTCCTACATCCGCGGCTGGGGCTTCCAGTACCTGCACAACCACCAGCCCACCAACTGTGTGGCTCTCCTCACCGGCAGCCTGGTTTACATGACCCAGGGTTACCTGCAGGAGGCCTACCTGTGGACCAAGCAGGTCCTGGCCATCATGGAGAAGTCTATGGTGCTGCTGCAGGACGTGACGGACGGCTCACTGTATGAGGGCGTGGCCTACGGGACGTACACCACCCGCTCTCTTTTCCAGTACATGTTCCTGGTGCAGAGACACTTCTCCATCAGCCACTTCGACCACCCCTGGCTCCACAAACACTTTGCCTTCATGTACAGGACCATCCTGCCAGGGTTCCAGAGGACTGTAGCCATAGCAGATTCCAACTACAACTGGTTCTACGGGCCCGAGAGCCAGCTGGTGTTCCTGGATCGCTATGTGATGAGGAACGGCAGTGGAAACTGGCTGGCTGAGCGGATCCATCAAAACCGGGTGTTGGAGGGGCCAGGACAGGCCGGGAAGGGACAGAGATGGTGCACACTGCACACAGAGTTCATCTGGTATGATCCCAGCCTGACTCCCAGGGCTCCATCAGACTTTGGTACATCCCAACTCCACTACTTTGAGGACTGGGGGGTCGTCACTTATGGAAGTTCTCTACCCGCAGACACCAACCACACCTTCCTCTCCTTTAAGTCGGGGAAGCTGGGTGGTCGGGCCATATTTGACATCGTTCACAGGAACAAGTACAAAGACTGGATCAAAGGTTGGCGGAACTTTAACGCTGGCCACGAGCACCCTGACCAGAACAGCTTTACGTTCGCCCCTAACGGTGTTCCTTTTATCACGGAGGCTCTGTACGGGCCCAAGTACACCTTCCTCAACAACGCAGTGCTGTTCTCCCCGGCTACCTCGGGAAGCTGCTTCAAGCCATGGGACGGCCAGGTCACAGAGGCCTGCGACTCCAAGTGGCTGAAGTACAAGGTGGGGCTGCCGGCGGACGCCCAGGGCAGGGTGGAGGCGGCTCTGGAAAGGCAGGGCATGGTGTTCATCCGTGGGGAGGGCCAGTCGGCCTACAACCCTGACCTGAAGATCAGGAGCTTCCAGAGGAACCTGCTGCTCCTGCACCCCCAGTTGCTGGTCCTGGTTGATCATATCCATCTGGAGACAGACAGCCCAACCAGGGCCATGAGTGCCTTCTTCCACAACACGGACCTGCCCTTTAAGGACACCAAAATAGACGGTGTGCACGGAGCCTTTGTCAGACATGGGGAAGACCCATATCAAATGTTTTGGATGGATGACACAGGCTTCAGTGAGAAAGGGGTCTTGGGGTACTGGAACTATCCCCGTGGTTACCCCTATAACGGCTCTAACTATGTGAATGTGACAATGCCTCTGAGGTATCCCCATACCAGGGTGGCCTACATCTTCTTTGGGCCAGGGGTGGACGTTCAGAGCTTTAGTCTGCGTGGCGATGCTAACAGGGTGGACATTTACCTGGCCACCAACGAGCACACCTACACTATCTACCTGCTGACCGGAGAGGTGGCCACCAAGCCTCTGTTCGCCATGGTGCTGGTGGACCAGAAGAAAATAGTATTTGAGAAAGCAGCAGGAGTGAAGAACAGCACGccggaggaggtagaggagtatGTCAATGTAGTAGAGGACAACCTCCAGCACGCCAAGCCTGTTTTCCAGCAGCTGGAGAGACACATCCTGGGCCGGGTGCTCAACACGGCCAGCTTCCGCAAGACGGCCGAGCGCCTCCTCCAGTTCTCCGACAAGAAGAAGACGGAGGCCATTGAGAAAATGTTTGCTCTGACTAAAAAACAGGGCAAGGGCAAGGGGGCCATTAAAGCCTTGGGGAACCTTGGGGACAAGCTCTCAGAGAGCCTGCCGGACATCTTTGGACAGATCGAGgtaaaggagaagaaggagagatcGAAGACAACAAAGAGGATTATTGAGGAGAGCCCCGAGGAAGACGGCGACTCCAGGGCCTTTATGGATTATGGAGACTCCAAAAAAGGCCGGAAGGGAGGCTTCGTGAAGGGTCGCAAGTTCAAGGAGGTCCACGTGTTGGCGACGGCCAACAGTGACAGTCTGTCGAACTCATCCTCTTATATCAGACTATTCCTCATCTTAAACATAGCCACCTTCTTCCTGCTTCTGTCTGTGTTATTGACACGCTTCCAGAGAGGCAGAAGTCTACACACCCAGAGGTGTTTCTATGGCATCCTGCTCATCGACAGCTTCATCTTACTCTGCCTCTACTCCTCCTGCTCTCATGCACAGTGTTGACATGATCACTGTGCGGCGAGGGGAATAGTCCATGTGCAGACCGATTGAACCGTTTGCCATGGGTGAATCAAATGCACCATACGCCTCAGTCTGAGCCAAGTCTACCTGATGAGTGTCCAGGAAAGAATTAATTCCAAATAGGAATTGATAGATTTAGTAACAAAATGAAGCCAGACCACCTTTGAGATCCTAAGCTTCTGTGGAGCTTTAGAATGGAGTCTGTGTGAACTTTTTAATGTAGCATTTAGAGTGGAACATGTTGCTTTATATCAAAGATTGCTAGCCACTAAAATGCAGAtatatctgcctctctctgtggacATGATAGAAAGAATGTACATATGTTCAAACAAGATATATTTTTGTGGTATTATTTCTACTCTTTGTAATGAGAAAAGAACAATATGCATAGATGtgcaaatgtgattttttttcatTGTGTATTTGCTTTTGCCTGATGAATGTGGGGACTTTGCAGATAAAAAGCTATAGAAATATGTTACCTCAGTCGGTGGTCCTCTCTGTGTCCATAACTGCAGTATAATACCATTGCATTTAACCTAATTGGCTTACCCGCATAACCGATCACATTGTCACCCCCACCACCCCAATTTAAGTCTTGTGATATTGTTCTTAAGCTGTCAGGGTCCATGTAATTCCATTTAGAGTAATACACTTGGGAAAGCACATTTTACTCTCCAACTGTAACAGATTTGCTTTCATGCTCTCACCTGTATGACTACTTGCAGTATGTTGGTGAAGCCCATTCACTTATATGCTAGCATAGATTCATCTTATTGTCCATCACCAAACCCACCTAATATAATTACACATCCTGCTCCTCCTCTTGATGTTATGATGTGGAATCGTTGGGAaccaatgttttttgttgttactGACTCTTAACTAATGGATCTACAGGCGGCACTACAGGGATGAGGACCTTTGACCTTTGTGTTACTTTGGTTGGGAGGAAACAACTACTATGCTAGTCATGGATATGTGAGGAAAGGGAGAACTCAAATGCTAGGAGAGGGGTCGATTTTTGGTGGGCATTGGTGGAAGAGATTTGGGGGggaaatactgtatgtaaatagcCTTGTACCTGTATTGGCATATCTGTCGTCAAATGAGTGTATGATAAAGTTATCCTCCGATCAGGAGGTTGGTTGTATCAATATTTACTCACTCCTGCTCAGTCACACAGATAATAAGGAGAGACATGCTAACAAGTCTTCACTTCCTCTGGTGTGTTTTGAACATGTGAGGGTGggcactgtctctctttctgtaaattCCCAGGTGTGTCTACTGAAAATGTGTACGCCAACATTACAGTTTAGATTCTAGATTCTAGACACATGACTCCTCTGCCTGCAGGGGGAGGagctacaacacaacacaccgcTAGTTGAATTAAATTTGATTAGGTGGGTGGGGAGCTCAAtccactataccactacagcCTAAGTCTGCTGTATCTTGCTAATGAATTTACCTAAACTATGAGTCATGGAAGCCCTAGTCTCTTGTGACAGTGCAGAGATTTAGTTCTGGGTGCCGAGATTATGAAAGCCCTCATGACAATCAGGTAGCATCTTTTGGTCAGGGCTGGCTAGCAACAATCAGAATTCATTGTTTTGTCATCTCATTAAAAAATGAATTTTCACTGCCTTTTATCATTGTCATGTCATTCAATAAAGAGTTTTATGCAAAATCAAA
>XM_036975678.1
GTCAGATCATTACAAAATGGGATTCGACTGTTTCAAAATGTGTTTTAGACTGTTTGGCTACTTTCAATTCTACACATATATTCTCACTACCTGGCTGTTTGTGTCTACAAATCAGTAATTTCTGTCTCTCCCCTACTTCTTTAGTCACTTTCCTCTACTGCCCCTCCTCATTCGGCAGAATTGCTGACGTTCTTCTCTCCAAAACCTTGCGCAAAGAGGGTATACTTTGTTTCACTACTTGAAGAATCAACGTATTCGGATGCATGTCACGGGGATTACATTTATAACACAGAAATGACTTGTAGGGGGAGTGTCAAATCTGGACTACAATTGTACAACAACGGGTTTTGACAGCTGAGCTCTGTTGGAAATGCCACTGCGCCCTCTCTGATGTGAGGATGAGGACCTACACCCGAGGGGCCCCCACAGTGTTCTTCATAAGTCTACTGTGGCCCCTGGTGGCCCCGGTGGTGGGGGTGGCGGAGGAGACGATAGACCCCAGTGGAGGGATACCCTTCATGGGAGGGAACTACGATGGACACCCCATGCTGTACTTCGGCCAGGGCGAGGTGGAGGAGTTGCAGTCGGCGGCGGCTGGGACACACCGGGAGATGGCCGCGAGGATCCGCGAGGCGGGGGAGGCCATGCTGGAGCACCCTGAGGAGTACCTGCCCCCCTGGAGCCCGGCCGAGTTCAGCGCCCGCTGGAACGAGGTGTATGGAAACAACCTGGGAGTGTTGTCTATGTTCTGTCTGCTCTACCCACACAGGGCCGGGGCCCTCAACCTGGCCAAGGATTACATGGAGAGGATGGCAGCTCAGCCTAGTTGGTTGGTAAAGGATGCTCCCTGGGATGAGGTTCCTCTAGCCCACTCTCTGGTTGGCTTCGCCACAGCGTATGATTTCCTGTATGAGTACCTGAGCAAGGTGCAGCAGGAGCGCTTCCTGCAGGTGATCGGCAACGCTACACGCTACATGTATGAGAAGTCCTACATCCGCGGCTGGGGCTTCCAGTACCTGCACAACCACCAGCCCACCAACTGTGTGGCTCTCCTCACCGGCAGCCTGGTTTACATGACCCAGGGTTACCTGCAGGAGGCCTACCTGTGGACCAAGCAGGTCCTGGCCATCATGGAGAAGTCTATGGTGCTGCTGCAGGACGTGACGGACGGCTCACTGTATGAGGGCGTGGCCTACGGGACGTACACCACCCGCTCTCTTTTCCAGTACATGTTCCTGGTGCAGAGACACTTCTCCATCAGCCACTTCGACCACCCCTGGCTCCACAAACACTTTGCCTTCATGTACAGGACCATCCTGCCAGGGTTCCAGAGGACTGTAGCCATAGCAGATTCCAACTACAACTGGTTCTACGGGCCCGAGAGCCAGCTGGTGTTCCTGGATCGCTATGTGATGAGGAACGGCAGTGGAAACTGGCTGGCTGAGCGGATCCATCAAAACCGGGTGTTGGAGGGGCCAGGACAGGCCGGGAAGGGACAGAGATGGTGCACACTGCACACAGAGTTCATCTGGTATGATCCCAGCCTGACTCCCAGGGCTCCATCAGACTTTGGTACATCCCAACTCCACTACTTTGAGGACTGGGGGGTCGTCACTTATGGAAGTTCTCTACCCGCAGACACCAACCACACCTTCCTCTCCTTTAAGTCGGGGAAGCTGGGTGGTCGGGCCATATTTGACATCGTTCACAGGAACAAGTACAAAGACTGGATCAAAGGTTGGCGGAACTTTAACGCTGGCCACGAGCACCCTGACCAGAACAGCTTTACGTTCGCCCCTAACGGTGTTCCTTTTATCACGGAGGCTCTGTACGGGCCCAAGTACACCTTCCTCAACAACGCAGTGCTGTTCTCCCCGGCTACCTCGGGAAGCTGCTTCAAGCCATGGGACGGCCAGGTCACAGAGGCCTGCGACTCCAAGTGGCTGAAGTACAAGGTGGGGCTGCCGGCGGACGCCCAGGGCAGGGTGGAGGCGGCTCTGGAAAGGCAGGGCATGGTGTTCATCCGTGGGGAGGGCCAGTCGGCCTACAACCCTGACCTGAAGATCAGGAGCTTCCAGAGGAACCTGCTGCTCCTGCACCCCCAGTTGCTGGTCCTGGTTGATCATATCCATCTGGAGACAGACAGCCCAACCAGGGCCATGAGTGCCTTCTTCCACAACACGGACCTGCCCTTTAAGGACACCAAAATAGACGGTGTGCACGGAGCCTTTGTCAGACATGGGGAAGACCCATATCAAATGTTTTGGATGGATGACACAGGCTTCAGTGAGAAAGGGGTCTTGGGGTACTGGAACTATCCCCGTGGTTACCCCTATAACGGCTCTAACTATGTGAATGTGACAATGCCTCTGAGGTATCCCCATACCAGGGTGGCCTACATCTTCTTTGGGCCAGGGGTGGACGTTCAGAGCTTTAGTCTGCGTGGCGATGCTAACAGGGTGGACATTTACCTGGCCACCAACGAGCACACCTACACTATCTACCTGCTGACCGGAGAGGTGGCCACCAAGCCTCTGTTCGCCATGGTGCTGGTGGACCAGAAGAAAATAGTATTTGAGAAAGCAGCAGGAGTGAAGAACAGCACGccggaggaggtagaggagtatGTCAATGTAGTAGAGGACAACCTCCAGCACGCCAAGCCTGTTTTCCAGCAGCTGGAGAGACACATCCTGGGCCGGGTGCTCAACACGGCCAGCTTCCGCAAGACGGCCGAGCGCCTCCTCCAGTTCTCCGACAAGAAGAAGACGGAGGCCATTGAGAAAATGTTTGCTCTGACTAAAAAACAGGGCAAGGGCAAGGGGGCCATTAAAGCCTTGGGGAACCTTGGGGACAAGCTCTCAGAGAGCCTGCCGGACATCTTTGGACAGATCGAGgtaaaggagaagaaggagagatcGAAGACAACAAAGAGGATTATTGAGGAGAGCCCCGAGGAAGACGGCGACTCCAGGGCCTTTATGGATTATGGAGACTCCAAAAAAGGCCGGAAGGGAGGCTTCGTGAAGGGTCGCAAGTTCAAGGAGGTCCACGTGTTGGCGACGGCCAACAGTGACAGTCTGTCGAACTCATCCTCTTATATCAGACTATTCCTCATCTTAAACATAGCCACCTTCTTCCTGCTTCTGTCTGTGTTATTGACACGCTTCCAGAGAGGCAGAAGTCTACACACCCAGAGGTGTTTCTATGGCATCCTGCTCATCGACAGCTTCATCTTACTCTGCCTCTACTCCTCCTGCTCTCATGCACAGTGTTGACATGATCACTGTGCGGCGAGGGGAATAGTCCATGTGCAGACCGATTGAACCGTTTGCCATGGGTGAATCAAATGCACCATACGCCTCAGTCTGAGCCAAGTCTACCTGATGAGTGTCCAGGAAAGAATTAATTCCAAATAGGAATTGATAGATTTAGTAACAAAATGAAGCCAGACCACCTTTGAGATCCTAAGCTTCTGTGGAGCTTTAGAATGGAGTCTGTGTGAACTTTTTAATGTAGCATTTAGAGTGGAACATGTTGCTTTATATCAAAGATTGCTAGCCACTAAAATGCAGAtatatctgcctctctctgtggacATGATAGAAAGAATGTACATATGTTCAAACAAGATATATTTTTGTGGTATTATTTCTACTCTTTGTAATGAGAAAAGAACAATATGCATAGATGtgcaaatgtgattttttttcatTGTGTATTTGCTTTTGCCTGATGAATGTGGGGACTTTGCAGATAAAAAGCTATAGAAATATGTTACCTCAGTCGGTGGTCCTCTCTGTGTCCATAACTGCAGTATAATACCATTGCATTTAACCTAATTGGCTTACCCGCATAACCGATCACATTGTCACCCCCACCACCCCAATTTAAGTCTTGTGATATTGTTCTTAAGCTGTCAGGGTCCATGTAATTCCATTTAGAGTAATACACTTGGGAAAGCACATTTTACTCTCCAACTGTAACAGATTTGCTTTCATGCTCTCACCTGTATGACTACTTGCAGTATGTTGGTGAAGCCCATTCACTTATATGCTAGCATAGATTCATCTTATTGTCCATCACCAAACCCACCTAATATAATTACACATCCTGCTCCTCCTCTTGATGTTATGATGTGGAATCGTTGGGAaccaatgttttttgttgttactGACTCTTAACTAATGGATCTACAGGCGGCACTACAGGGATGAGGACCTTTGACCTTTGTGTTACTTTGGTTGGGAGGAAACAACTACTATGCTAGTCATGGATATGTGAGGAAAGGGAGAACTCAAATGCTAGGAGAGGGGTCGATTTTTGGTGGGCATTGGTGGAAGAGATTTGGGGGggaaatactgtatgtaaatagcCTTGTACCTGTATTGGCATATCTGTCGTCAAATGAGTGTATGATAAAGTTATCCTCCGATCAGGAGGTTGGTTGTATCAATATTTACTCACTCCTGCTCAGTCACACAGATAATAAGGAGAGACATGCTAACAAGTCTTCACTTCCTCTGGTGTGTTTTGAACATGTGAGGGTGggcactgtctctctttctgtaaattCCCAGGTGTGTCTACTGAAAATGTGTACGCCAACATTACAGTTTAGATTCTAGATTCTAGACACATGACTCCTCTGCCTGCAGGGGGAGGagctacaacacaacacaccgcTAGTTGAATTAAATTTGATTAGGTGGGTGGGGAGCTCAAtccactataccactacagcCTAAGTCTGCTGTATCTTGCTAATGAATTTACCTAAACTATGAGTCATGGAAGCCCTAGTCTCTTGTGACAGTGCAGAGATTTAGTTCTGGGTGCCGAGATTATGAAAGCCCTCATGACAATCAGGTAGCATCTTTTGGTCAGGGCTGGCTAGCAACAATCAGAATTCATTGTTTTGTCATCTCATTAAAAAATGAATTTTCACTGCCTTTTATCATTGTCATGTCATTCAATAAAGAGTTTTATGCAAAATCAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K01794 DSE; chondroitin-glucuronate 5-epimerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036975679.1 False 4302 mRNA 0.49 5 13829056 13855278
XM_036975678.1 True 5000 mRNA 0.50 6 13829056 13858174

Neighbor

gene id symbol gene type direction distance location
LOC110522128 LOC106607726 coding downstream 1558 13825800 ~ 13827498 (-)
LOC110522127 LOC106607724 coding downstream 7145 13809748 ~ 13821911 (-)
LOC110522125 epha7 coding downstream 181789 13572893 ~ 13647267 (-)
LOC110522122 map3k7 coding downstream 631821 13173776 ~ 13197235 (-)
LOC110522120 bach2 coding downstream 678056 13052105 ~ 13151000 (-)
LOC110522132 LOC106607728 coding upstream 10 13858184 ~ 13916995 (-)
LOC110522135 prs27 coding upstream 280542 14138716 ~ 14153769 (-)
LOC110522136 prs27 coding upstream 306958 14165132 ~ 14174146 (-)
LOC118964438 prs27 coding upstream 326922 14185096 ~ 14187192 (-)
LOC110522138 LOC106607732 coding upstream 364834 14223008 ~ 14226550 (-)
G322732 LOC106607723 non-coding downstream 29433 13799249 ~ 13799623 (-)
G322580 NA non-coding downstream 92877 13735968 ~ 13736179 (-)
G322563 NA non-coding downstream 105924 13722888 ~ 13723132 (-)
G322423 NA non-coding downstream 256166 13572159 ~ 13572890 (-)
G322832 LOC107661334 non-coding upstream 75249 13933423 ~ 13933691 (-)
G322833 NA non-coding upstream 77183 13935357 ~ 13935572 (-)
G322850 NA non-coding upstream 96766 13954940 ~ 13955642 (-)
G322882 NA non-coding upstream 131958 13990132 ~ 13990412 (-)
G322885 NA non-coding upstream 133349 13991523 ~ 13991802 (-)
lyrm2 lyrm2 other downstream 846293 12981284 ~ 12982769 (-)
LOC110522115 LOC106571283 other downstream 1281539 12545954 ~ 12547517 (-)
G320883 NA other downstream 1510658 12318003 ~ 12318398 (-)
LOC110522088 LOC106607688 other downstream 1935483 11891326 ~ 11893699 (-)
G323167 prs27 other upstream 270315 14128489 ~ 14187171 (-)
G324432 NA other upstream 1395690 15253864 ~ 15255008 (-)
rnf217 rnf217 other upstream 2161254 16019428 ~ 16125180 (-)
G325696 NA other upstream 2481158 16339332 ~ 16340707 (-)
G325960 LOC106607776 other upstream 2788581 16646755 ~ 16662881 (-)

Expression


Co-expression Network