LOC110522132 (LOC106607728)


Basic Information

Item Value
gene id LOC110522132
gene name LOC106607728
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 13858184 ~ 13916995 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036975680.1
ACGTACTACGGTACACCCTGACCGGAAGCTTCGGGCACAAACCTTTTGTGCACGTTCTGCGCACCTCCACCTTATATCACTATTGCGGTTGATGCGGAATGtcaaacaatgaatgaacaattCGTAGACCTTGATTTACTAAATGTGTACGACAGTGCCTGGTTATTGGAGACATTCTGTAAAGCATCCCCTTGTAACAGCAACCCACGTGTTGCCGTAGGAACAAATATATTGGAGGGTACAGATTCGACATTGACAGATACAGTGTGCAGGCGTGTGTAGCCAACAGTACAATATCCTTGGTTTCGATTGTTTCTAGGGCCCTCGTTAAAATGAGCGAATATTTTTCCCTTTCAGATTGTGATGTAATTGGTTTTGATTTGGACCACACTCTCTGTCGGTACCATTTGAAGGAGACCTCTAGGCTGATCTATGAGAGCTTTACCAGGTATCTGGTAGAGCATAAAGACTATGACAAGGACCTTCTTATATTGACCCCTGCTTCCTGGGATTTCTGTTTCAAAGGCTTAGTGGTAGACCTTGAGGATGGAAACTTGGTTAAGTTGGCTGAAGATGGAACCGTTTTACGAGCAACCCATGGGACCAATAACCTCAGCACAGAGGAGATCATTAAACATTATGGTTCAAAAAGGGAATGGAAGAACTTTGATAGCCTTAATACCTCATTTACGAAATCGACAAAGTACTATTTTTATGACAACTATTTTGATCTTCCCGGGGCTCTTCTCTGTGGAAGGGTTGTGGATATGTTGCGTAagCGTGGGAACGAGGTGAATTCAGACTTCTGGAAAGACATTGTTGCTGCCATCGACCACAATTACAACACATCTGCATTCAAAGAGGATGCAGGATGGTACTTCCCCAGTGTAAAGAGGGACCCTGGCCGTTACCTGCAGCCCTGCTCAGAGTCCGTCAAGACCTGGCTGAGGAGCATGAAGAGTGCTGGGAAGGTCCTCCTGCTGATCACCAGCTCCCACAGTGACTATTGCAGGCTCATCTGTGACCACATCCTGGGGAAGGACTGGGAGGAGCTGTttgacatcatcatcaccaacgcCTTGAAGCCTGGGTTCTTCTCCCTGGTGCCCCAACAGAGGCCCTTCAGGACTCTGGTGAATGATGTGGAGGAGAGTGAAGGACTGCCGTCCCTGGACAAGCCTGGCTGGTACTCTCAAGGAAACTGGCCCCACCTCCACCAGCTGCTCAAAACAATGACTGGGAAACCTGAGCCCAAGGTGGTGTACTTTGGGGATAGCATGCGGTCGGACATGTTCCCTGCTAGCACGTTCGGGAAGTGGGAGACGGTGATGATCGTGgaggaaatggagggagagggcatCCCGAGGTGCGACGCAGCGAAGACCAACGAGGCCCAAGCGGAGCCTCGGGGCAAGAAGGGAAAGTTTGAGGACCAGGGCATGAAGGCGCCCTCTGCTCCATCAGAACAGTGGGGATCCTACTTTGTGGACTCACACAAGAGTGGTGAAGGGGACGAGGAGAGCCAGAAACTCACCTGGTGCTGCCATAGCATCCACAAATACAGCACCATGGCCATCCCCAGTGTGGAGTCCATTGCAGATCTGCCTCTGAACTACAAGTTCCCCAGGTTCTGTCCCAACAAACCCTGCACCACCGGCTACTACCCCAGACCCCCAGATTCCCTGCTGAGAAAGTTCCAGAGTCAGTCGTCTTAAAGAGTCCCTCCTCCCCAGAgtcgctccccccccccctcgcccTCCTCAGCCTAAAGGGGAGGAATGTGCCTCCATCTCGCCTGTAGTTCCACACCTGAACCACGCCATCGATCCCTCTGGCACAGGAAATCGCGCTCACATTGGTAGAAACCATGGGAATGTGAAAGCACAGTATCTCTCTCTGCAAGTAACCTGGCTACATTTGAACGTTGTTCTGTACGTGGATTATTGTACATGTGTGTGGAAAAAATGTGACTTGccaattgtatgtgtgtgggcgTGTCAGCAAACAGTGCTGATTTTAGAGCATATTATTCATATTGTTTCATGTGAAGACCACTTTTGTAATGTTGCTAGATAGGTAATTGATGTTCCAGTTAAACCCCCTACAAGTACATCATTCAATGTAAGTTAATAACTCTTCAGAGTACTAAAAAAAACTTTAAGCCCTGTAAATACTGTCCTACATTTAGTTTTTTGCTGTGTTTCCTTACCTCAAAAAACATGATTGGAGCTGGAGTGCAACGTTGCAGTCACAGCGGTGTTGTCTGTTGTCTCCAGAGAGAAATTCCTAATAATTCATTATGTCCAGTATCCTtggtatgatgtgtgtgtgtgtgtgtataatacatAACAAACAGCCattttggttttctgtttcactGTATGCATTTCAGTTACAGTAACTTAAGATGTCCTTTACGATAAAGCATTTCCCCTGTGTTTGTCACAGATtccccccggtactgctgctcattccgtgcaCCAGTTCCGGAGTTCTAcatcaccggccttctaggcTTCACTGAACTGTCTAAATACGCACTCATGGTTCCCATTTCCCCTTATTAGTAATTGTATATACTCTGTTCACCATTGTCACCATGCCCGTTGGTCCTGTGAGTACCTGTGTTGTTTCGGCTTTCGTGCTGCGTGTTTTGTacaattgttattacgggtctcgtcccgtgcattgttattacgggtcttacCTCGTTCTTTTGTTTGGGTTGCATCCCAGTGTGTTTTGTATTTGTTCTGGGCATCGTCCCCGTGCCTTTCATGGCATGTTGTTTAATTTGGGTGAAGTATTAAAACCCCCTATgatgtattcctgcgcctgtcgcCAATAATTTATGCAACGTAACAATATTGATTTTGTGGAAGGTGTTTAAGAGGATTGTTCTTGAAGAAATTGCACAATCAGTCCTTAGTGTTACCTTTTTTGTTGAAAGAATATGAAAATAATTCAACTGTAATATTGGATGCTTAAAGATTATGCTCTGTGTACTCTGTTATTCTTTTGGTACAACAGTAAACTATAGTGCGGTTGGAGTGACTACTGTGTAAAAATGGGTTATACTTATGCTTCATATGCAGTACCAATTTAAAGATATGCTTTAATTGACTTCTGAATGGTTACATGTGTTGGTTAGCTGCATATAGACTAGTTGTATTATAATAATAAGAAACAAGTCTTAATTTGCTTGCTTGTAGAAGTATTTTTACAGGAAGTACTTTAGAGAGGACAGCAGACCTTAATTGGTTTTTGGATTATTTATGTTTTAAACGTGTGTGTTGGTGTTAAATGCAGTGCAGTTTTGGTGATTGTATTCCATTTACTTTTTCCCCCCATCTGATTTAGAAACTTTTATTTGCTCATTTGCCTTATGTTCAATTCATTAGTGGTATTTTAGTGTTCTAGAGGAGATGCAGGGATAGTGTTCGATGTACTGTCTGTGAAATAAATAAAGTTATACAATTTTGTTAGACACTGCATTTTTCTGATGATTTGACTTTTCTTGAAAGTTCGAATAAAACATCTGAAAA

Function

NR:

description
5'-nucleotidase domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036975680.1 True 3545 mRNA 0.44 12 13858184 13916995

Neighbor

gene id symbol gene type direction distance location
dse LOC106607725 coding downstream 10 13829056 ~ 13858174 (-)
LOC110522128 LOC106607726 coding downstream 30686 13825800 ~ 13827498 (-)
LOC110522127 LOC106607724 coding downstream 36273 13809748 ~ 13821911 (-)
LOC110522125 epha7 coding downstream 210917 13572893 ~ 13647267 (-)
LOC110522122 map3k7 coding downstream 660949 13173776 ~ 13197235 (-)
LOC110522135 prs27 coding upstream 221721 14138716 ~ 14153769 (-)
LOC110522136 prs27 coding upstream 248137 14165132 ~ 14174146 (-)
LOC118964438 prs27 coding upstream 268101 14185096 ~ 14187192 (-)
LOC110522138 LOC106607732 coding upstream 306013 14223008 ~ 14226550 (-)
LOC110522143 NA coding upstream 564330 14481325 ~ 14486331 (-)
G322732 LOC106607723 non-coding downstream 58561 13799249 ~ 13799623 (-)
G322580 NA non-coding downstream 122005 13735968 ~ 13736179 (-)
G322563 NA non-coding downstream 135052 13722888 ~ 13723132 (-)
G322423 NA non-coding downstream 285294 13572159 ~ 13572890 (-)
G322832 LOC107661334 non-coding upstream 16428 13933423 ~ 13933691 (-)
G322833 NA non-coding upstream 18362 13935357 ~ 13935572 (-)
G322850 NA non-coding upstream 37945 13954940 ~ 13955642 (-)
G322882 NA non-coding upstream 73137 13990132 ~ 13990412 (-)
G322885 NA non-coding upstream 74528 13991523 ~ 13991802 (-)
lyrm2 lyrm2 other downstream 875421 12981284 ~ 12982769 (-)
LOC110522115 LOC106571283 other downstream 1310667 12545954 ~ 12547517 (-)
G320883 NA other downstream 1539786 12318003 ~ 12318398 (-)
LOC110522088 LOC106607688 other downstream 1964611 11891326 ~ 11893699 (-)
G323167 prs27 other upstream 211494 14128489 ~ 14187171 (-)
G324432 NA other upstream 1336869 15253864 ~ 15255008 (-)
rnf217 rnf217 other upstream 2102433 16019428 ~ 16125180 (-)
G325696 NA other upstream 2422337 16339332 ~ 16340707 (-)
G325960 LOC106607776 other upstream 2729760 16646755 ~ 16662881 (-)

Expression


Co-expression Network