LOC110522136 (prs27)


Basic Information

Item Value
gene id LOC110522136
gene name prs27
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 14165132 ~ 14174146 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600269.2
ggtacatACCTCCTCCAACCAAAGGTATTTTaaatacaggacacacacaaaGCCGTAGCAGCTAATAGGATGGAGTCGGGGTGGGTATTGTGTGCTGTTGTATTTGCGTTGACCTGCATGGGAAAAGgtggcCATTCACAGGCAAATGTGTGTGGCATTGCTTCTCTCAACACAAAGATTGTCGGGGGTCAGGATGCAGCTGCAGGGAGCTGGCCATGGCAGGCCAGTCTGCACCGCTCCAACCGCCATTTTTGTGGAGGCTCCCTTATCAACAAAGAGTGGGTGCTGACTGCCGCTCACTGCTTCCCCAGCACCAGCACGTCCGGCCTGCTTGTCTACCTGGGCCGGCAGAATCAGCAAAGCATCAACTCCAATGAGGTATCCCAAACGGTCTCTCAGATCATCTGCAACCCGAACTACAACAGTGCAACCAGCGACAATGATATATGTTTGCTGAAGCTCTCATCACCTGTCACCTTCACTGACTACATCCAGCCGGTCTGCCTTGCAGCAGAGGACAGCACCTACTACACTGGCACTAATAGCTGGGTCACCGGATGGGGCGATATCAATAGTGATGTGCCCCTTCCCTCACCCGGGACCCTACAGGAGGTGACTGTGCCGGTAGTGGGGAACAGGAAGTGTAACTGTCTCTATACTGGATTTAGTTCAATCACAAACAACATGATCTGTGCTGGTCTACTGAGTGGAGGAAAGGATTCCTGTCAGGGAGACTCCGGGGGGCCAATGGTGAGCAAACAGGGTCTGGTCTGGATCCAGTCTGGGGTTGTTAGTTTCGGACAAGGCTGTGCCGTAGCAAATTTCCCAGGAGTGTACACCAGAGTGTCCCAGTACCAGACCTGGATCAACAGCCAGATCAGCACTGACATGCCAGGCTTCGTCACCTTCTCCTCCAGTGGGACTGACTCTGATCTCAATGTCACCTGTAATGCACTGTCCAGTGGGGCCacactcttctccctctctcttattctcatctctctcgctcttctaaTAGATGCTTAACTTTACTCACTGTATGTGATAAGTACTGGAGTAGTATGTTTATACGCTGAACCAAAAGTGATGGTTTTATTTTAATATGAATCTACTAATACTTGTTGATTGTGATTGTTAATGGAATTTGTGTTTAAATGAATGATTTGAGTATTCAACCCTGAAACCATAaaattgtatgaaattga

Function

NR:

description
serine protease 27-like

GO: NA

KEGG:

id description
K09628 PRSS27; serine protease 27

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600269.2 True 1205 mRNA 0.49 6 14165132 14174146

Neighbor

gene id symbol gene type direction distance location
LOC110522135 prs27 coding downstream 11363 14138716 ~ 14153769 (-)
LOC110522132 LOC106607728 coding downstream 248137 13858184 ~ 13916995 (-)
dse LOC106607725 coding downstream 306958 13829056 ~ 13858174 (-)
LOC110522128 LOC106607726 coding downstream 337634 13825800 ~ 13827498 (-)
LOC110522127 LOC106607724 coding downstream 343221 13809748 ~ 13821911 (-)
LOC118964438 prs27 coding upstream 10950 14185096 ~ 14187192 (-)
LOC110522138 LOC106607732 coding upstream 48862 14223008 ~ 14226550 (-)
LOC110522143 NA coding upstream 307179 14481325 ~ 14486331 (-)
ccn6 wisp3 coding upstream 323394 14497540 ~ 14509695 (-)
mfsd4b LOC106607740 coding upstream 499135 14673281 ~ 14679530 (-)
G322939 NA non-coding downstream 136656 14028261 ~ 14028476 (-)
G322919 NA non-coding downstream 150982 14013867 ~ 14014150 (-)
G322911 NA non-coding downstream 160847 14004064 ~ 14004285 (-)
G322909 NA non-coding downstream 162593 14002330 ~ 14002539 (-)
G323207 NA non-coding upstream 28763 14202909 ~ 14203186 (-)
G323208 NA non-coding upstream 29056 14203202 ~ 14203450 (-)
G323223 NA non-coding upstream 52751 14226897 ~ 14227098 (-)
G323228 NA non-coding upstream 61670 14235816 ~ 14236167 (-)
G323229 NA non-coding upstream 62627 14236773 ~ 14237004 (-)
LOC110522122 map3k7 other downstream 982563 13173776 ~ 13197235 (-)
lyrm2 lyrm2 other downstream 1182369 12981284 ~ 12982769 (-)
LOC110522115 LOC106571283 other downstream 1617615 12545954 ~ 12547517 (-)
G320883 NA other downstream 1846734 12318003 ~ 12318398 (-)
LOC110522088 LOC106607688 other downstream 2271559 11891326 ~ 11893699 (-)
G324432 NA other upstream 1079718 15253864 ~ 15255008 (-)
rnf217 rnf217 other upstream 1845282 16019428 ~ 16125180 (-)
G325696 NA other upstream 2165186 16339332 ~ 16340707 (-)
G325960 LOC106607776 other upstream 2472609 16646755 ~ 16662881 (-)
vgll2a LOC106607788 other upstream 3388724 17559268 ~ 17566213 (-)

Expression


Co-expression Network