Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_022436 |
| gene name | kif1b |
| gene type | coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 29396182 ~ 29505645 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| symbol | description |
|---|---|
| kif1b | Predicted to enable ATP hydrolysis activity; microtubule binding activity; and plus-end-directed microtubule motor activity. Involved in axonal transport and motor neuron axon guidance. Acts upstream of or within several processes, including macrophage differentiation; plasma membrane bounded cell projection organization; and posterior lateral line system development. Predicted to be located in cytoplasm. Predicted to be part of kinesin complex. Predicted to be active in several cellular components, including axon; dendrite; and microtubule. Is expressed in central nervous system; nervous system; neurons; and spinal cord. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 2A1; carcinoma (multiple); multiple sclerosis; neuroblastoma; and pheochromocytoma. Orthologous to human KIF1B (kinesin family member 1B). |
| id | name | namespace |
|---|---|---|
| GO:0030099 | myeloid cell differentiation | biological_process |
| GO:0030705 | cytoskeleton-dependent intracellular transport | biological_process |
| GO:0007018 | microtubule-based movement | biological_process |
| GO:0016192 | vesicle-mediated transport | biological_process |
| GO:0030225 | macrophage differentiation | biological_process |
| GO:0008298 | intracellular mRNA localization | biological_process |
| GO:0048917 | posterior lateral line ganglion development | biological_process |
| GO:0048918 | posterior lateral line nerve development | biological_process |
| GO:1990535 | neuron projection maintenance | biological_process |
| GO:0048675 | axon extension | biological_process |
| GO:0043005 | neuron projection | cellular_component |
| GO:0030424 | axon | cellular_component |
| GO:0030425 | dendrite | cellular_component |
| GO:0005871 | kinesin complex | cellular_component |
| GO:0005874 | microtubule | cellular_component |
| GO:0031410 | cytoplasmic vesicle | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0008574 | ATP-dependent microtubule motor activity, plus-end-directed | molecular_function |
| GO:0003777 | microtubule motor activity | molecular_function |
| GO:0008017 | microtubule binding | molecular_function |
| GO:0016887 | ATPase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-030820-1 | Predicted to enable ATP hydrolysis activity; microtubule binding activity; and plus-end-directed microtubule motor activity. Involved in axonal transport and motor neuron axon guidance. Acts upstream of or within several processes, including macrophage differentiation; plasma membrane bounded cell projection organization; and posterior lateral line system development. Predicted to be located in cytoplasm. Predicted to be part of kinesin complex. Predicted to be active in several cellular components, including axon; dendrite; and microtubule. Is expressed in central nervous system; nervous system; neurons; and spinal cord. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 2A1; carcinoma (multiple); multiple sclerosis; neuroblastoma; and pheochromocytoma. Orthologous to human KIF1B (kinesin family member 1B). |
| ensembl_id | ENSDARG00000037020 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00044254 | False | 8275 | mRNA | 0.47 | 47 | 29396182 | 29505463 |
| TCONS_00044255 | False | 8161 | mRNA | 0.47 | 46 | 29396186 | 29502287 |
| TCONS_00044256 | False | 3741 | mRNA | 0.50 | 21 | 29439807 | 29502287 |
| TCONS_00044257 | True | 4012 | mRNA | 0.49 | 22 | 29439807 | 29505645 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_022435 | pgd | coding | downstream | 1677 | 29381441 ~ 29394505 (-) |
| XLOC_022434 | sst6 | coding | downstream | 19323 | 29375676 ~ 29376859 (-) |
| XLOC_022433 | NA | coding | downstream | 37968 | 29333853 ~ 29358214 (-) |
| XLOC_022432 | CR677617.1 | coding | downstream | 138466 | 29185852 ~ 29257716 (-) |
| XLOC_022431 | casz1 | coding | downstream | 391429 | 28954137 ~ 29004753 (-) |
| XLOC_022437 | ube4b | coding | upstream | 1670 | 29507315 ~ 29553691 (-) |
| XLOC_022438 | nmnat1-rbp7a | coding | upstream | 48946 | 29554591 ~ 29569842 (-) |
| XLOC_022439 | clstn1 | coding | upstream | 74939 | 29580584 ~ 29668286 (-) |
| XLOC_022440 | NA | coding | upstream | 169350 | 29674995 ~ 29706359 (-) |
| XLOC_022441 | ctnnbip1 | coding | upstream | 205924 | 29711569 ~ 29751730 (-) |
| XLOC_022427 | NA | non-coding | downstream | 942479 | 28433175 ~ 28453703 (-) |
| XLOC_022417 | NA | non-coding | downstream | 1600259 | 27788369 ~ 27795923 (-) |
| XLOC_022416 | NA | non-coding | downstream | 1623810 | 27770481 ~ 27772372 (-) |
| XLOC_022443 | NA | non-coding | upstream | 315556 | 29821201 ~ 29822565 (-) |
| XLOC_022446 | FP101914.1 | non-coding | upstream | 335566 | 29841211 ~ 29844314 (-) |
| XLOC_022448 | CU695073.1 | non-coding | upstream | 395006 | 29900651 ~ 29901235 (-) |
| XLOC_022449 | NA | non-coding | upstream | 503618 | 30009263 ~ 30010819 (-) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000001_11715436_11736738 | KIF1B | coding | CI01000001 | null | 11715112 ~ 11736738 (-) |
