XLOC_022439 (clstn1)


Basic Information

Item Value
gene id XLOC_022439
gene name clstn1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 29580584 ~ 29668286 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044265
GAAAGAGAAGAGAGCTGAACGGCGGTGGCGGCGGCAGCCATCTTAAAACTACCGCACTAATCCGAGATATACATCTTCTGGATATTTCTGCGACGCCGAGCCCAATCAGACCGTTTCGGGCGAGAGGAGACAGAGTAACGCAGTTTTAATCTTTCCCTGTTTTTATTACGAAGACGCGATGCGGATCCGCGGGGTCAAACCTTTCGCTTCTGCAGTCGGTCTGCTTTTAGGACTATTATACGCGGTGGATGCAGCCAAAGTAAATAAGCACAAGCCGTGGATTGAGACCACGTATCATGGTATCGTGACAGAAAACGACGACAAAGTTCTGCTGGACCCTCCTCTGATAGCCTTGGATAAAGATGCTCCTTTGCGCTACGCAGGAGAGATCTGCGGCTTCAGGATTCACGGGCAGAATGTGCCTTTCGAGGCGGTGGTGTTGGATAAGTCCACTGGGGAAGGCGTGATCCGGGCCAAGGATAAACTAGATTGTGAGCTGCAGAAAGAGCATACCTTCACCATCCAGGCCTACGACTGTGGAGAGGGACCTGACGGCGGAAACATGAAGAAATCTCACAAGGCCACCGTCCACATCCAAGTGAATGACGTGAACGAGTACTCTCCAGTGTTCAAAGAGAAGTCCTACAAAGCCACAGTAATCGAGGGCAAGAAGTACGACAGCATCATGAAGGTGGAGGCCGTGGACGCAGACTGCTCTTTCCAGTTCAGTCAGATCTGCAGCTACGAGATTGTCACCCCCGATGTGCCCTTCACCATTGATAAGGATGGCAACATCAAGAACACAGAGAAGTTGAACTACGGCAAGGAGCGCATGTACAAACTCACAGTGACTGCCTATGACTGTGGTAAAAACCGAGCATCCGAGGACGTCCTGGTTAAGATCAACATCAAGCCCACCTGCAAACCGAGCTGGCAAGGATTTAACAAAAGGATTGAGTATGAGCCTGGTACAGGAAGCCTAGCGCTGTTTCCCAGCATGCATCTGGAGACCTGTGAGGAGCCGATCACCTCCATCCAGGCCAGCATCATGTTGGAGACCAACCACATCGGCAAGGGCTGCGATCGAGACACTTACTCTGAAAAATCCCTGCACAAGCTATGCGGTGCCAGCTCTGGCACTGTGGAGCTTCTGCCTGCTCCCAGCAACTCTGCCAATTGGACTGTAGGTCTGCCCACTGACAATGGGCATGACAGTGACCAGGTGTTTGAGTTCAACGGCACTCAGGCCATCAAGGTTCCTGAGGGGGTGGTGAGCACCACCCTGAAGGAACCCTTCACCATCTCTGTGTGGATGAGACACGGGCCTGGAGGACGAGAGAAGGAGACCATCCTCTGCAACTCCGACAAGACTGAGATGAACAGACACCATTATTCTCTATATGTGCACAACTGTCGCCTGGTGCTGCTGCTGCGTCAGGAACCCACCGAATCGGAGAGCTACAAACCTGCTGAATTCCACTGGAAACTCGATCAAGTGTGTGATAAAGAATGGCATCACTATGTGTTGAACATCGAGTTCCCGGCAGTGACTTTGTTTGTGGATGGAGGCACCTTTGAGCCGTTCCTGGTTACAGAGGATTACCCTCTGCATACCTCCAAGATTGAGACCCAGCTCACCATCGGCGCCTGCTGGCAAGGTGGCAGTGCCCGCATGACTCAGTTCTTCCGGGGAAACCTGGCTGGACTCATGATCCGCTCTGGAAAACTGGAGAACAAGAAGGTGATCGACTGCCTGTACACCTGCAAGGAGGGGCTCGATGTGCAGCTTCCAGAAGAAGTGGCCTCTGCTGTCAAGGTGGAGTTTAACCCTAACCAGTCATCACTGAGTCTGGAGGGAGATGACATTGAGAGCTTTGAGAAGGTCATGCAGCACATCTCCTACCTGAACTCCAGACAGTTCCCAACTCCAGGAATACGCCACCTCCGTGTCTCCACCACTGTCAAATGCTTCAATGAGGAGACCTGTATCTCTGTGCCGGACTCTGAAGGCTATGTGATGGTTCTCCAGCCAGAGGAGCCAAAGATCAGCCTGAGCGGAATCGATCATTTTGCACGTGGAGCAGCTGAATTTGAGAGCGTGGAGGGTGTTACGCTGTTCCCAGAGCTGCGCATCGTCAGCACCATCACCCGAGAGGTGGAGGTGGAGGCAGAGGCTGAGACTGAAGCCGAAGGAGAGGATGATCCCACAGTGCAAGAGACGGTGGTGTCTGAGGAGATCATGCACAACTTGGACACGTGTGAGGTGACTGTGGTGGGAGAGGATCTGAATGGAGATCATGAGAGTCTGGAGGTGGATCTGGCTCAGATTCAGCAGAGAGCTCTGGAGATGAGCTCCTCTAACGTGGGCATGGTCATCACAGGGGTAAACACCATGGCCAACTATGAACAGGTCCTGCATCTGATCCGCTACAGGAACTGGCACACAGAGGCTCTGTTTGACAGGAAGTTTAAACTTGTCTGCTCTGAGCTCAATGGCCGCTACATCAGCAATGAATTCAAAGTGGAGGTCAACGTGATCCACACAGCCAACCCTATGGATCATGCCAACAACGCTATGGTGCAGCCTCAGTTCATCAGCCAAGTGCAGCATGCTTCAGTGGACTTGTCTGGACACAACCTGGTCAACACACATCAGGCCTCAGTCGTCCCCAGTGCTGCCACCATTGTTATCGTTGTATGCGTGAGCTTCCTGGTGTTTATGATCATCCTGGGCGTCTTCCGTATCCGAGCGGCCCACCAGCGCACCATGAGAGACCAGGAGAACGGAAAAGAGAATGAGATGGACTGGGATGATTCAGCACTCACCATCACTGTCAACCCAATGGAGACTTACGAGGACCAGCACAGCAGCGAAGAGGAAGGagatgaggaagaggaggaaagcGAGGATGGAGAGGAGGAAGACGACATCACCAGCGCAGAGTCGGACAGCAGCGAGGATGAGGCCGGAGAACAGGAGGATCAGCAGGGCTCCAGCAGACAGCAGCAGCTGGAGTGGGACGACTCCACTCTCACCTACTGATCCACACAGTACACACTACTAcaattacaaaaacacacacacaaacacaactatAAAGCCACCCCTCACAGTCACATCCCTCTGCCAATAGGGACGCCCTTGTTCCCCCTACCCAAGGAGCCATGCGTATAAGCGCAGatatatgtacaatataaaagCGAATATATCCGGTGTCTGTCGTGACAGGTGTTGCAGTCCGCTTCATTCCCACCCGCTGAGGCTTCCCTAATGACATCATATTGTGGTGGTATTCAGTGTAGTATAGTATCACAGCTATCTCAATACAACTTCCtaatttattcagcttttttcTGGAATTTTGGCCTACGTTTGCATTTTCCACACTTCTTATTTTCTCCGGGAAATGATTTACTGTATACTCCACATAATGCACCATGAGGTTTAAGGGTTGGTTTGCTCTGAGGATGCTTTCCGATGACTTTTCCTTTTTCCCTCTTTATATTGCATGGCAAGATTTGCAATCATGGGTATGGAAGAATACAACCGCTTTTTGATATTTTGTAAATAAGACCATGTAATTAGTCAGTGTGTTAGTGAAAGCCTAACCAGCGGTTTCCggtatctttaaaaaaagaaaaaaaaaggcacaGTGTACCTGCTGTAGAACATTTATGTCAGATGCTCTTAGCATGTTTCAGAAACCTTCGGTAAATCTCACGCTCGTACAAAAAAAGACGTCCGCTTCACGGAGAGAAACCCATGACTGAGGCTGAGGTTTCTGTGGCAAAGTGTCGTTCATTTTGTCTTTTCTCTTGGAGGTGGGTGCGCGCGCATCTTTTCCTTTCATTCCGTTTGGTTTCGTACTGTCGAGTTGGTTCAGTGCTTTACATATGCTAATTTTAGCTGGGCTTGCAATGGCACAAATGCTACACCAAGGCTTCAATGTTTTAAATCCAGTGACTAATAATCACATTCAGGTGATGATGAATATACGgttgttgttatttgttttattttcttcttcttgtgGTACTGTATGTTGTACAGTTTAGGCACACTGCAGTTATTTAAGCCATTCTGAAGTGATAGTGCTTGGGTTTCCTCTCATAAATAATAGAGACCAATTTGGAATCACAGTACGCACTCTCATAACCCAGTCTGAATAACATTTATGACTGAAATGACGTTGAAAAAAATGGGTGTGCTGGTGATTATCGACAATGTGAGCACTGCAATAGACTTCAGTTGGTGAAGTGCTTGCTTAAGATGCTCGGTTACATAACCGGGgggttatttttgtttaatataattcaGGATTAAAGAGAGTTCACCCCAAAACTGTCTTCATGTACTCTACTTGTTTTAGACTTATGTTGAACCcaatagatattttgaagattgtttgCAACCAAACAGCTAGTGGTAGCCATTGATTTGTCTagttaccagcattcttcaaatgatCTTTTAATTCACATAGGTTTGGAAACAAATTGAGAAAATgccattttttgggtgaactcttgcTTTAATCCACATGATTCTAGTCATTTGGAAGCCCCTAAATACATAACAAGGGCTATCACAGCGCGTTAAAAGAATTAACTTCAACCCTTTTCAACTATTTTTGCAGGATGGCCGCTAGATTTTATTGTACATGTACTGCAGAgttgtgtaaagatatttgtttacatttggtAAACTTTTATTCCTTCGTTTTTTTGGGTGACACTATCAATCTACTCCAGATTTGCAGGTCATTTCTCCTGGTAGTCGCTCTCAGAATCATACCATCGTTTCATTTCCTTACTGTGATTGGACATTTCGGGATGCACCCCCCTCCGAAAGTGGTCAGTTATTGGGGAAAATACTATTCCGCTCCCATTGGGCTTGAAAAAGAATGTCAGTTATCTAGCAGATTGTACTTTGACTGATTGTTTCGTATAAGACGGATGTGAAGCTTTAGGGTACTGCATTCAGTTCCTTCGTTTTGTTTACATGCATGTCTGTTCTCAGTTCTCAGCCTAAATTATGTGGCGGTGATTGGTGGATCGAAAATTATTTGTCATGTCAGAAAAGGTACAAAGTCGATTAGAAGGTCTATTTTTGTGACCCCTTTTATTGGTAGGCGTTTTTATCAGGTCCCCCTTCAAAAAATTGtggttttaagaaataataaataagcaaGTGAATAAATAATGGTCTATAATTCAGCTGGTGGAGTTGGGAGTGCCTTTTGCCTATCACAGCGCATTAATAACACAACTAACCAAACACTCATCCATGCCATTTTTTAGTTCTTtgcaattttttaattattaattcttAGATTTGGTACAGGTCTGGAGAAGTGATCTTATTtaattctgattatttttttggTTACAATAGGGATCAACAGCTAGTTTTATCAAGAGTGGACGTTTTAATTGTCCTACATAGATGTCTCGTGTTCATGTCGATGTGTAGAGAAAATAGGTCCATACTGTTCTcatcaataaatattgtaataaatccTGTTTGAGGAGATTCACTTTGAAAAgatgtacattattattataataataggcTGCATATATGTGTATAGTGAAAGGTGCATTTCCTGAAAACGCTGTGAAGCGCAGCATGAAATTCACGAGGAGCCGAAACATGACCGTTTCTCACTCAAATGTAATAGTCGCTCACGGTGTATTGCAGACGTTTGATCGATGTAGACCATTCCATGAGACCAAATTCAGTAGATTAAATGTTTGTACtgaaagatttcaaataaaatcaaaatcgcACAATTGTTTCTATCCTCCCTCCTTTTCCCCTGATGCAAATATATTCATCTGCTGGTTCTCAAGGGAAAACGATGTGATTTTAAGACACCGACGCAGAAACTTCCATAATAAACAGGCAGTTTGTGCTGGATGTGAACCGCTGCGATCGGTTGCAGTCTATCGgggcattgtttttttgtttttttgcatgtgtAACACAGATCTGAATATTTGCTGTAAACTGGCACAtggatgtgtgtgttcagagtggtGTAGATGGCGATATACTACTGAATCAAAGATTATCTGTCACAGATTTGCAGCCTTCGGTGGTCATTGTTCACGtttttggattactttatttttttttgctctagAAATGAAACATGGGGATGTCGTAGAACTGTTGGATGCTGCCTTCCAGCTCATTCACTTTTCTATTATTCCGAGGAATAATTGTAGTGAAGTTGATGCTTGCTCATGAACAAAATAAAGGATGAGATGGGAATAAA
>TCONS_00044266
GAAGAGAGCTGAACGGCGGTGGCGGCGGCAGCCATCTTAAAACTACCGCACTAATCCGAGATATACATCTTCTGGATATTTCTGCGACGCCGAGCCCAATCAGACCGTTTCGGGCGAGAGGAGACAGAGTAACGCAGTTTTAATCTTTCCCTGTTTTTATTACGAAGACGCGATGCGGATCCGCGGGGTCAAACCTTTCGCTTCTGCAGTCGGTCTGCTTTTAGGACTATTATACGCGGTGGATGCAGCCAAAGTAAATAAGCACAAGCCGTGGATTGAGACCACGTATCATGGTATCGTGACAGAAAACGACGACAAAGTTCTGCTGGACCCTCCTCTGATAGCCTTGGATAAAGATGCTCCTTTGCGCTACGCAGAGTCGGACAGCAGCGAGGATGAGGCCGGAGAACAGGAGGATCAGCAGGGCTCCAGCAGACAGCAGCAGCTGGAGTGGGACGACTCCACTCTCACCTACTGATCCACACAGTACACACTACTAcaattacaaaaacacacacacaaacacaactatAAAGCCACCCCTCACAGTCACATCCCTCTGCCAATAGGGACGCCCTTGTTCCCCCTACCCAAGGAGCCATGCGTATAAGCGCAGatatatgtacaatataaaagCGAATATATCCGGTGTCTGTCGTGACAGGTGTTGCAGTCCGCTTCATTCCCACCCGCTGAGGCTTCCCTAATGACATCATATTGTGGTGGTATTCAGTGTAGTATAGTATCACAGCTATCTCAATACAACTTCCtaatttattcagcttttttcTGGAATTTTGGCCTACGTTTGCATTTTCCACACTTCTTATTTTCTCCGGGAAATGATTTACTGTATACTCCACATAATGCACCATGAGGTTTAAGGGTTGGTTTGCTCTGAGGATGCTTTCCGATGACTTTTCCTTTTTCCCTCTTTATATTGCATGGCAAGATTTGCAATCATGGGTATGGAAGAATACAACCGCTTTTTGATATTTTGTAAATAAGACCATGTAATTAGTCAGTGTGTTAGTGAAAGCCTAACCAGCGGTTTCCggtatcttt
>TCONS_00044267
ATGCGGATCCGCGGGGTCAAACCTTTCGCTTCTGCAGTCGGTCTGCTTTTAGGACTATTATACGCGGTGGATGCAGCCAAAGTAAATAAGCACAAGCCGTGGATTGAGACCACGTATCATGGTATCGTGACAGAAAACGACGACAAAGTTCTGCTGGACCCTCCTCTGATAGCCTTGGATAAAGATGCTCCTTTGCGCTACGCAGAGAGTTTTGAGGTGACCTTCACCAAAGAAGGAGAGATCTGCGGCTTCAGGATTCACGGGCAGAATGTGCCTTTCGAGGCGGTGGTGTTGGATAAGTCCACTGGGGAAGGCGTGATCCGGGCCAAGGATAAACTAGATTGTGAGCTGCAGAAAGAGCATACCTTCACCATCCAGGCCTACGACTGTGGAGAGGGACCTGACGGCGGAAACATGAAGAAATCTCACAAGGCCACCGTCCACATCCAAGTGAATGACGTGAACGAGTACTCTCCAGTGTTCAAAGAGAAGTCCTACAAAGCCACAGTAATCGAGGGCAAGAAGTACGACAGCATCATGAAGGTGGAGGCCGTGGACGCAGACTGCTCTTTCCAGTTCAGTCAGATCTGCAGCTACGAGATTGTCACCCCCGATGTGCCCTTCACCATTGATAAGGATGGCAACATCAAGAACACAGAGAAGTTGAACTACGGCAAGGAGCGCATGTACAAACTCACAGTGACTGCCTATGACTGTGGTAAAAACCGAGCATCCGAGGACGTCCTGGTTAAGATCAACATCAAGCCCACCTGCAAACCGAGCTGGCAAGGATTTAACAAAAGGATTGAGTATGAGCCTGGTACAGGAAGCCTAGCGCTGTTTCCCAGCATGCATCTGGAGACCTGTGAGGAGCCGATCACCTCCATCCAGGCCAGCATCATGTTGGAGACCAACCACATCGGCAAGGGCTGCGATCGAGACACTTACTCTGAAAAATCCCTGCACAAGCTATGCGGTGCCAGCTCTGGCACTGTGGAGCTTCTGCCTGCTCCCAGCAACTCTGCCAATTGGACTGTAGGTCTGCCCACTGACAATGGGCATGACAGTGACCAGGTGTTTGAGTTCAACGGCACTCAGGCCATCAAGGTTCCTGAGGGGGTGGTGAGCACCACCCTGAAGGAACCCTTCACCATCTCTGTGTGGATGAGACACGGGCCTGGAGGACGAGAGAAGGAGACCATCCTCTGCAACTCCGACAAGACTGAGATGAACAGACACCATTATTCTCTATATGTGCACAACTGTCGCCTGGTGCTGCTGCTGCGTCAGGAACCCACCGAATCGGAGAGCTACAAACCTGCTGAATTCCACTGGAAACTCGATCAAGTGTGTGATAAAGAATGGCATCACTATGTGTTGAACATCGAGTTCCCGGCAGTGACTTTGTTTGTGGATGGAGGCACCTTTGAGCCGTTCCTGGTTACAGAGGATTACCCTCTGCATACCTCCAAGATTGAGACCCAGCTCACCATCGGCGCCTGCTGGCAAGGTGGCAGTGCCCGCATGACTCAGTTCTTCCGGGGAAACCTGGCTGGACTCATGATCCGCTCTGGAAAACTGGAGAACAAGAAGGTGATCGACTGCCTGTACACCTGCAAGGAGGGGCTCGATGTGCAGCTTCCAGAAGAAGTGGCCTCTGCTGTCAAGGTGGAGTTTAACCCTAACCAGTCATCACTGAGTCTGGAGGGAGATGACATTGAGAGCTTTGAGAAGGTCATGCAGCACATCTCCTACCTGAACTCCAGACAGTTCCCAACTCCAGGAATACGCCACCTCCGTGTCTCCACCACTGTCAAATGCTTCAATGAGGAGACCTGTATCTCTGTGCCGGACTCTGAAGGCTATGTGATGGTTCTCCAGCCAGAGGAGCCAAAGATCAGCCTGAGCGGAATCGATCATTTTGCACGTGGAGCAGCTGAATTTGAGAGCGTGGAGGGTGTTACGCTGTTCCCAGAGCTGCGCATCGTCAGCACCATCACCCGAGAGGTGGAGGTGGAGGCAGAGGCTGAGACTGAAGCCGAAGGAGAGGATGATCCCACAGTGCAAGAGACGGTGGTGTCTGAGGAGATCATGCACAACTTGGACACGTGTGAGGTGACTGTGGTGGGAGAGGATCTGAATGGAGATCATGAGAGTCTGGAGGTGGATCTGGCTCAGATTCAGCAGAGAGCTCTGGAGATGAGCTCCTCTAACGTGGGCATGGTCATCACAGGGGTAAACACCATGGCCAACTATGAACAGGTCCTGCATCTGATCCGCTACAGGAACTGGCACACAGAGGCTCTGTTTGACAGGAAGTTTAAACTTGTCTGCTCTGAGCTCAATGGCCGCTACATCAGCAATGAATTCAAAGTGGAGGTCAACGTGATCCACACAGCCAACCCTATGGATCATGCCAACAACGCTATGGTGCAGCCTCAGTTCATCAGCCAAGTGCAGCATGCTTCAGTGGACTTGTCTGGACACAACCTGGTCAACACACATCAGGCCTCAGTCGTCCCCAGTGCTGCCACCATTGTTATCGTTGTATGCGTGAGCTTCCTGGTGTTTATGATCATCCTGGGCGTCTTCCGTATCCGAGCGGCCCACCAGCGCACCATGAGAGACCAGGAGAACGGAAAAGAGAATGAGATGGACTGGGATGATTCAGCACTCACCATCACTGTCAACCCAATGGAGACTTACGAGGACCAGCACAGCAGCGAAGAGGAAGGagatgaggaagaggaggaaagcGAGGATGGAGAGGAGGAAGACGACATCACCAGCGCAGAGTCGGACAGCAGCGAGGATGAGGCCGGAGAACAGGAGGATCAGCAGGGCTCCAGCAGACAGCAGCAGCTGGAGTGGGACGACTCCACTCTCACCTACTGA
>TCONS_00044268
AACTTATCAAGCAATATATTTTCAGAAGCCAAACCAGCCAGGTGTATCAAAATGTTATTTAGGCCCTTATTTTTGCGGTAGCCTGCAGTATAATAGTACAAAGAATATATTATATAGCTAacgttacactgtaaaaaatgctgggattcacacaatcgatttgtgttggatcaacaataaaggaattaaattaacttattggtttttacaaatttgtggattgaaaataaaacaattaagttgcccatCACATTTTTTGTAGGTATTTTGTTTTTCCCACACTAGTTCATGAAAACATGATGATAGCGATAATGACTAGCCTATCAAAATTCATTTTGATATTGAATTGTCAAAAGATGGTTTAAAACATCACACAACATCATTTTACACGTGCAAAAACTATCCACCCCGCATCTTTTCAATCCACACCCTCTCTGAAAGTCTGAGGTTGCCTATGGAAAGCGGCCCGCACTCAGTCCCACAATAACACGCGTGACGTCAGCCCGTCACCGCTCCCGTTGGATGCAGCAGTAGCGGAGCGGCGAGAGACACTGAACGGTGATTGAAAGAGAAGAGAGCTGAACGGCGGTGGCGGCGGCAGCCATCTTAAAACTACCGCACTAATCCGAGATATACATCTTCTGGATATTTCTGCGACGCCGAGCCCAATCAGACCGTTTCGGGCGAGAGGAGACAGAGTAACGCAGTTTTAATCTTTCCCTGTTTTTATTACGAAGACGCGATGCGGATCCGCGGGGTCAAACCTTTCGCTTCTGCAGTCGGTCTGCTTTTAGGACTATTATACGCGGTGGATGCAGCCAAAGTAAATAAGCACAAGCCGTGGATTGAGACCACGTATCATGGTATCGTGACAGAAAACGACGACAAAGTTCTGCTGGACCCTCCTCTGATAGCCTTGGATAAAGATGCTCCTTTGCGCTACGCAGGAGAGATCTGCGGCTTCAGGATTCACGGGCAGAATGTGCCTTTCGAGGCGGTGGTGTTGGATAAGTCCACTGGGGAAGGCGTGATCCGGGCCAAGGATAAACTAGATTGTGAGCTGCAGAAAGAGCATACCTTCACCATCCAGGCCTACGACTGTGGAGAGGGACCTGACGGCGGAAACATGAAGAAATCTCACAAGGCCACCGTCCACATCCAAGTGAATGACGTGAACGAGTACTCTCCAGTGTTCAAAGAGAAGTCCTACAAAGCCACAGTAATCGAGGGCAAGAAGTACGACAGCATCATGAAGGTGGAGGCCGTGGACGCAGACTGCTCTTTCCAGTTCAGTCAGATCTGCAGCTACGAGATTGTCACCCCCGATGTGCCCTTCACCATTGATAAGGATGGCAACATCAAGAACACAGAGAAGTTGAACTACGGCAAGGAGCGCATGTACAAACTCACAGTGACTGCCTATGACTGTGGTAAAAACCGAGCATCCGAGGACGTCCTGGTTAAGATCAACATCAAGCCCACCTGCAAACCGAGCTGGCAAGGATTTAACAAAAGGATTGAGTATGAGCCTGGTACAGGAAGCCTAGCGCTGTTTCCCAGCATGCATCTGGAGACCTGTGAGGAGCCGATCACCTCCATCCAGGCCAGCATCATGTTGGAGACCAACCACATCGGCAAGGGCTGCGATCGAGACACTTACTCTGAAAAATCCCTGCACAAGCTATGCGGTGCCAGCTCTGGCACTGTGGAGCTTCTGCCTGCTCCCAGCAACTCTGCCAATTGGACTGTAGGTCTGCCCACTGACAATGGGCATGACAGTGACCAGGTGTTTGAGTTCAACGGCACTCAGGCCATCAAGGTTCCTGAGGGGGTGGTGAGCACCACCCTGAAGGAACCCTTCACCATCTCTGTGTGGATGAGACACGGGCCTGGAGGACGAGAGAAGGAGACCATCCTCTGCAACTCCGACAAGACTGAGATGAACAGACACCATTATTCTCTATATGTGCACAACTGTCGCCTGGTGCTGCTGCTGCGTCAGGAACCCACCGAATCGGAGAGCTACAAACCTGCTGAATTCCACTGGAAACTCGATCAAGTGTGTGATAAAGAATGGCATCACTATGTGTTGAACATCGAGTTCCCGGCAGTGACTTTGTTTGTGGATGGAGGCACCTTTGAGCCGTTCCTGGTTACAGAGGATTACCCTCTGCATACCTCCAAGATTGAGACCCAGCTCACCATCGGCGCCTGCTGGCAAGACTTCTCAGGACATGACAATGACACTGAGACTCTCTCAGAGCCTTTGACAGGTGGCAGTGCCCGCATGACTCAGTTCTTCCGGGGAAACCTGGCTGGACTCATGATCCGCTCTGGAAAACTGGAGAACAAGAAGGTGATCGACTGCCTGTACACCTGCAAGGAGGGGCTCGATGTGCAGCTTCCAGAAGAAGTGGCCTCTGCTGTCAAGGTGGAGTTTAACCCTAACCAGTCATCACTGAGTCTGGAGGGAGATGACATTGAGAGCTTTGAGAAGGTCATGCAGCACATCTCCTACCTGAACTCCAGACAGTTCCCAACTCCAGGAATACGCCACCTCCGTGTCTCCACCACTGTCAAATGCTTCAATGAGGAGACCTGTATCTCTGTGCCGGACTCTGAAGGCTATGTGATGGTTCTCCAGCCAGAGGAGCCAAAGATCAGCCTGAGCGGAATCGATCATTTTGCACGTGGAGCAGCTGAATTTGAGAGCGTGGAGGGTGTTACGCTGTTCCCAGAGCTGCGCATCGTCAGCACCATCACCCGAGAGGTGGAGGTGGAGGCAGAGGCTGAGACTGAAGCCGAAGGAGAGGATGATCCCACAGTGCAAGAGACGGTGGTGTCTGAGGAGATCATGCACAACTTGGACACGTGTGAGGTGACTGTGGTGGGAGAGGATCTGAATGGAGATCATGAGAGTCTGGAGGTGGATCTGGCTCAGATTCAGCAGAGAGCTCTGGAGATGAGCTCCTCTAACGTGGGCATGGTCATCACAGGGGTAAACACCATGGCCAACTATGAACAGGTCCTGCATCTGATCCGCTACAGGAACTGGCACACAGAGGCTCTGTTTGACAGGAAGTTTAAACTTGTCTGCTCTGAGCTCAATGGCCGCTACATCAGCAATGAATTCAAAGTGGAGGTCAACGTGATCCACACAGCCAACCCTATGGATCATGCCAACAACGCTATGGTGCAGCCTCAGTTCATCAGCCAAGTGCAGCATGCTTCAGTGGACTTGTCTGGACACAACCTGGTCAACACACATCAGGCCTCAGTCGTCCCCAGTGCTGCCACCATTGTTATCGTTGTATGCGTGAGCTTCCTGGTGTTTATGATCATCCTGGGCGTCTTCCGTATCCGAGCGGCCCACCAGCGCACCATGAGAGACCAGGAGAACGGAAAAGAGAATGAGATGGACTGGGATGATTCAGCACTCACCATCACTGTCAACCCAATGGAGACTTACGAGGACCAGCACAGCAGCGAAGAGGAAGGagatgaggaagaggaggaaagcGAGGATGGAGAGGAGGAAGACGACATCACCAGCGCAGAGTCGGACAGCAGCGAGGATGAGGCCGGAGAACAGGAGGATCAGCAGGGCTCCAGCAGACAGCAGCAGCTGGAGTGGGACGACTCCACTCTCACCTACTGA

Function

symbol description
clstn1 Predicted to enable calcium ion binding activity. Acts upstream of or within several processes, including axon arborization; establishment or maintenance of microtubule cytoskeleton polarity; and homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in Golgi membrane; cell projection; and synapse. Predicted to be integral component of membrane. Predicted to be active in cell surface and postsynaptic membrane. Is expressed in several structures, including axis; musculature system; nervous system; neural tube; and tail bud. Orthologous to human CLSTN1 (calsyntenin 1).

GO:

id name namespace
GO:0051965 positive regulation of synapse assembly biological_process
GO:0030951 establishment or maintenance of microtubule cytoskeleton polarity biological_process
GO:1990126 retrograde transport, endosome to plasma membrane biological_process
GO:0140060 axon arborization biological_process
GO:0098930 axonal transport biological_process
GO:0048670 regulation of collateral sprouting biological_process
GO:0050806 positive regulation of synaptic transmission biological_process
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules biological_process
GO:0045211 postsynaptic membrane cellular_component
GO:0009986 cell surface cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko04515 Cell adhesion molecules

ZFIN:

id description
ZDB-GENE-040426-1064 Predicted to enable calcium ion binding activity. Acts upstream of or within several processes, including axon arborization; establishment or maintenance of microtubule cytoskeleton polarity; and homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in Golgi membrane; cell projection; and synapse. Predicted to be integral component of membrane. Predicted to be active in cell surface and postsynaptic membrane. Is expressed in several structures, including axis; musculature system; nervous system; neural tube; and tail bud. Orthologous to human CLSTN1 (calsyntenin 1).

Ensembl:

ensembl_id ENSDARG00000031720

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044265 False 6281 mRNA 0.46 17 29580584 29667722
TCONS_00044266 False 1065 mRNA 0.46 3 29583235 29667716
TCONS_00044267 False 2895 mRNA 0.53 18 29583822 29667544
TCONS_00044268 True 3658 mRNA 0.51 18 29583822 29668286

Neighbor

gene id symbol gene type direction distance location
XLOC_022438 nmnat1-rbp7a coding downstream 10742 29554591 ~ 29569842 (-)
XLOC_022437 ube4b coding downstream 26893 29507315 ~ 29553691 (-)
XLOC_022436 kif1b coding downstream 74939 29396182 ~ 29505645 (-)
XLOC_022435 pgd coding downstream 186079 29381441 ~ 29394505 (-)
XLOC_022434 sst6 coding downstream 203725 29375676 ~ 29376859 (-)
XLOC_022440 NA coding upstream 6709 29674995 ~ 29706359 (-)
XLOC_022441 ctnnbip1 coding upstream 43283 29711569 ~ 29751730 (-)
XLOC_022442 pik3cd coding upstream 88317 29756603 ~ 29812667 (-)
XLOC_022443 NA coding upstream 152915 29821201 ~ 29822565 (-)
XLOC_022444 zgc:194189 coding upstream 155000 29823286 ~ 29824146 (-)
XLOC_022433 NA non-coding downstream 222370 29333853 ~ 29358214 (-)
XLOC_022432 CR677617.1 non-coding downstream 322868 29185852 ~ 29257716 (-)
XLOC_022427 NA non-coding downstream 1126881 28433175 ~ 28453703 (-)
XLOC_022417 NA non-coding downstream 1784661 27788369 ~ 27795923 (-)
XLOC_022416 NA non-coding downstream 1808212 27770481 ~ 27772372 (-)
XLOC_022446 FP101914.1 non-coding upstream 172925 29841211 ~ 29844314 (-)
XLOC_022448 CU695073.1 non-coding upstream 232365 29900651 ~ 29901235 (-)
XLOC_022449 NA non-coding upstream 340977 30009263 ~ 30010819 (-)

Expression


Co-expression Network