Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_022443 |
| gene name | NA |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 29821201 ~ 29822565 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0099643 | signal release from synapse | biological_process |
| GO:0007267 | cell-cell signaling | biological_process |
| GO:0007268 | chemical synaptic transmission | biological_process |
| GO:0007269 | neurotransmitter secretion | biological_process |
| GO:0001505 | regulation of neurotransmitter levels | biological_process |
| GO:0098916 | anterograde trans-synaptic signaling | biological_process |
| GO:0099536 | synaptic signaling | biological_process |
| GO:0099537 | trans-synaptic signaling | biological_process |
| GO:0006836 | neurotransmitter transport | biological_process |
| GO:0030672 | synaptic vesicle membrane | cellular_component |
| GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane | cellular_component |
| GO:0030133 | transport vesicle | cellular_component |
| GO:0044456 | obsolete synapse part | cellular_component |
| GO:0005834 | heterotrimeric G-protein complex | cellular_component |
| GO:0045202 | synapse | cellular_component |
| GO:1905360 | GTPase complex | cellular_component |
| GO:0099501 | exocytic vesicle membrane | cellular_component |
| GO:0099503 | secretory vesicle | cellular_component |
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0070382 | exocytic vesicle | cellular_component |
| GO:0008021 | synaptic vesicle | cellular_component |
| GO:0044306 | neuron projection terminus | cellular_component |
| GO:0043195 | terminal bouton | cellular_component |
| GO:0098793 | presynapse | cellular_component |
| GO:0030658 | transport vesicle membrane | cellular_component |
| GO:0098797 | plasma membrane protein complex | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00044741 | False | 711 | lncRNA | 0.41 | 3 | 29821201 | 29822565 |
| TCONS_00044742 | True | 429 | lncRNA | 0.40 | 2 | 29821783 | 29822565 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_022442 | pik3cd | coding | downstream | 8534 | 29756603 ~ 29812667 (-) |
| XLOC_022441 | ctnnbip1 | coding | downstream | 69471 | 29711569 ~ 29751730 (-) |
| XLOC_022440 | NA | coding | downstream | 114842 | 29674995 ~ 29706359 (-) |
| XLOC_022439 | clstn1 | coding | downstream | 152915 | 29580584 ~ 29668286 (-) |
| XLOC_022438 | nmnat1-rbp7a | coding | downstream | 251359 | 29554591 ~ 29569842 (-) |
| XLOC_022444 | zgc:194189 | coding | upstream | 721 | 29823286 ~ 29824146 (-) |
| XLOC_022445 | tmem201 | coding | upstream | 4569 | 29827134 ~ 29858087 (-) |
| XLOC_022446 | FP101914.1 | coding | upstream | 18646 | 29841211 ~ 29844314 (-) |
| XLOC_022447 | slc25a33 | coding | upstream | 38678 | 29861243 ~ 29878643 (-) |
| XLOC_022448 | CU695073.1 | coding | upstream | 78086 | 29900651 ~ 29901235 (-) |
| XLOC_022433 | NA | non-coding | downstream | 462987 | 29333853 ~ 29358214 (-) |
| XLOC_022432 | CR677617.1 | non-coding | downstream | 563485 | 29185852 ~ 29257716 (-) |
| XLOC_022427 | NA | non-coding | downstream | 1367498 | 28433175 ~ 28453703 (-) |
| XLOC_022417 | NA | non-coding | downstream | 2025278 | 27788369 ~ 27795923 (-) |
| XLOC_022449 | NA | non-coding | upstream | 186698 | 30009263 ~ 30010819 (-) |
| XLOC_022451 | NA | non-coding | upstream | 231869 | 30054434 ~ 30059176 (-) |
| XLOC_022453 | CR456642.2 | non-coding | upstream | 694634 | 30517199 ~ 30698687 (-) |
