LOC118964414


Basic Information

Item Value
gene id LOC118964414
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 23489022 ~ 23491763 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118964414
ATGAATGGGTGGCACCACCTGAGTGAGCTGGTCCTGTTTGCCCTGGCCATGTAGGAGACCCTGAGAGAGATCAACAAAAACTCTCACATCTTCCAGCTCCGCGTGGGCATCGCTCATGGGCCTGTGGTTGCCAGGGTGATCAGCGCAACCAAGCCTCAGTATGACATCTGGGGACAACGGTGAACCTGGCGAGCCGCATGGACAGCACAGGCGTGAGCGGCCGCATCCAGGTGCCTGAGGCCACACAAGGGATCCTGGCTGCCTGGGGCTTCGTCCTGGAGCTGAGGAGACAGATCTACATCGAGGGGGTGTATGAGCGGCAGGGGAAAGTCCAGACTTACTTCATCTACAGCAGTCACACCCAAAGGGGCAGGAACACCCTGGCAGTGGTGGTGTTTGGCCTGGTACAGTCCAGGAAgaaggagaagcagagagtccAACAGAGTGTTGTTCAGCTTGGCCCCTAACAATGGACAGTGCTAGCAGAGGATTCTAGAGAGACCACCAAAGGCACTTCCTGTTTAGGGGGTCATGACTTCCTATGTTGTGAGTCGTCCAGCCCTGGCTCTAAACACCACTGTGGTGGATTAGCTGGTtgatcctcagagagagagagagaagatatactgtatgagatactgtatgtagtgaTTCTCGTGAGAGAAAACTGTACAGAACATGGGACCAAGTACCCCAAGGGATTAAAGTATTTTGTTGGGTCGGTTCAAGGGACACATTGGGTGTCATATGAAACATTATTCAGAGGACTTTCTCTTTGGCCCACAAGACTCCATCTTGTTTTGAACAGGAGGATCCACTGTCAGTCTTAGTTTTACTGAGTTTTAACAATCACCGTTAGGatgataatatatatttttttgccatATCTACATTAGCAGTACATATTTGTTAAATGTGTTTTCATGTTTATTTCTTACCTGACTGAGGCCAACACAGTGCACTACTCTTATAGACATCACATCTGTGCAAGACAATTTGATTACTATAAGAATTCACTGTAAGAGGAGTGCATTGTATTTACTTACTGATGTCATTAACCCTGCAGTTTACATGTTCGATTAGAGTCCAGACCTTTAAGCCATGATAATAAATGCCTCACTTCATCA

Function

NR:

description
PREDICTED: adenylate cyclase type 8-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118964414 True 1127 mRNA 0.47 4 23489022 23491763

Neighbor

gene id symbol gene type direction distance location
LOC100136772 LOC100136772 coding upstream 100452 23382192 ~ 23388570 (+)
snx9b snx9 coding upstream 132004 23324438 ~ 23357018 (+)
LOC118964451 NA coding upstream 375949 23107820 ~ 23113334 (+)
LOC110522349 ptpn14 coding upstream 533594 22853423 ~ 22955428 (+)
LOC110522347 LOC106607950 coding upstream 639588 22814283 ~ 22849434 (+)
parp1 parp1 coding downstream 3008 23494771 ~ 23506567 (+)
lin9 LOC106608031 coding downstream 17309 23509072 ~ 23525525 (+)
LOC110522421 LOC106608030 coding downstream 38149 23529912 ~ 23538153 (+)
nhsl1b nhsl1 coding downstream 50686 23542449 ~ 23719666 (+)
trnaa-ugc-7 NA coding downstream 58994 23550757 ~ 23550830 (+)
G333399 NA non-coding upstream 4955 23483828 ~ 23484067 (+)
G333398 NA non-coding upstream 5318 23483468 ~ 23483704 (+)
G333348 NA non-coding upstream 84503 23400991 ~ 23404519 (+)
G333252 NA non-coding upstream 251594 23235319 ~ 23237428 (+)
G333447 NA non-coding downstream 94455 23586218 ~ 23586493 (+)
G333452 NA non-coding downstream 104666 23596429 ~ 23596646 (+)
G333464 NA non-coding downstream 128333 23620096 ~ 23620517 (+)
G333466 NA non-coding downstream 135333 23627096 ~ 23627335 (+)
G333474 NA non-coding downstream 145516 23637279 ~ 23637627 (+)
G333079 smyd2 other upstream 530826 22955879 ~ 22958196 (+)
G332507 NA other upstream 895660 22592930 ~ 22593362 (+)
G332458 LOC106584613 other upstream 990026 22498500 ~ 22498996 (+)
LOC110522308 LOC106607893 other upstream 1787408 21683716 ~ 21701617 (+)
G330771 NA other upstream 2667865 20820668 ~ 20821157 (+)
ccdc167 ccdc167 other downstream 254066 23745535 ~ 23748393 (+)
G334116 NA other downstream 342058 23833821 ~ 23837875 (+)
si:ch211-51e12.7 NA other downstream 572068 24063831 ~ 24072963 (+)
G334475 NA other downstream 925819 24417582 ~ 24418946 (+)
G334473 armt1 other downstream 928351 24420114 ~ 24422731 (+)

Expression


Co-expression Network