Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110522421 |
| gene name | LOC106608030 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 23529912 ~ 23538153 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Golgi resident protein GCP60-like isoform X2 |
| id | description |
|---|---|
| K23935 | ACBD3; golgi resident protein GCP60 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021600797.2 | False | 4529 | mRNA | 0.47 | 8 | 23529912 | 23538153 |
| XM_021600798.2 | True | 4526 | mRNA | 0.47 | 8 | 23529912 | 23538153 |
23,521,000
23,522,000
23,523,000
23,524,000
23,525,000
23,526,000
23,527,000
23,528,000
23,529,000
23,530,000
23,531,000
23,532,000
23,533,000
23,534,000
23,535,000
23,536,000
23,537,000
23,538,000
23,539,000
23,540,000
23,541,000
NC_048568.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lin9 | LOC106608031 | coding | upstream | 4387 | 23509072 ~ 23525525 (+) |
| parp1 | parp1 | coding | upstream | 23345 | 23494771 ~ 23506567 (+) |
| LOC118964414 | NA | coding | upstream | 38149 | 23489022 ~ 23491763 (+) |
| LOC100136772 | LOC100136772 | coding | upstream | 141342 | 23382192 ~ 23388570 (+) |
| snx9b | snx9 | coding | upstream | 172894 | 23324438 ~ 23357018 (+) |
| nhsl1b | nhsl1 | coding | downstream | 4296 | 23542449 ~ 23719666 (+) |
| trnaa-ugc-7 | NA | coding | downstream | 12604 | 23550757 ~ 23550830 (+) |
| ccdc167 | ccdc167 | coding | downstream | 207382 | 23745535 ~ 23748393 (+) |
| LOC110522416 | NA | coding | downstream | 230336 | 23768487 ~ 23772991 (+) |
| si:ch211-225h24.2 | tdrp | coding | downstream | 240458 | 23778611 ~ 23801507 (+) |
| G333399 | NA | non-coding | upstream | 45845 | 23483828 ~ 23484067 (+) |
| G333398 | NA | non-coding | upstream | 46208 | 23483468 ~ 23483704 (+) |
| G333348 | NA | non-coding | upstream | 125393 | 23400991 ~ 23404519 (+) |
| G333252 | NA | non-coding | upstream | 292484 | 23235319 ~ 23237428 (+) |
| G333447 | NA | non-coding | downstream | 48065 | 23586218 ~ 23586493 (+) |
| G333452 | NA | non-coding | downstream | 58276 | 23596429 ~ 23596646 (+) |
| G333464 | NA | non-coding | downstream | 81943 | 23620096 ~ 23620517 (+) |
| G333466 | NA | non-coding | downstream | 88943 | 23627096 ~ 23627335 (+) |
| G333474 | NA | non-coding | downstream | 99126 | 23637279 ~ 23637627 (+) |
| G333079 | smyd2 | other | upstream | 571716 | 22955879 ~ 22958196 (+) |
| G332507 | NA | other | upstream | 936550 | 22592930 ~ 22593362 (+) |
| G332458 | LOC106584613 | other | upstream | 1030916 | 22498500 ~ 22498996 (+) |
| LOC110522308 | LOC106607893 | other | upstream | 1828298 | 21683716 ~ 21701617 (+) |
| G330771 | NA | other | upstream | 2708755 | 20820668 ~ 20821157 (+) |
| G334116 | NA | other | downstream | 295668 | 23833821 ~ 23837875 (+) |
| si:ch211-51e12.7 | NA | other | downstream | 525678 | 24063831 ~ 24072963 (+) |
| G334475 | NA | other | downstream | 879429 | 24417582 ~ 24418946 (+) |
| G334473 | armt1 | other | downstream | 881961 | 24420114 ~ 24422731 (+) |
