Item | Value |
---|---|
gene id | si:ch211-51e12.7 |
gene name | NA |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048568.1 |
NCBI id | CM023222.3 |
chromosome length | 46841314 |
location | 24063831 ~ 24072963 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
hypothetical protein EH28_04567 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036975982.1 | False | 2233 | mRNA | 0.45 | 7 | 24063831 | 24072962 |
XM_036975981.1 | False | 2325 | mRNA | 0.45 | 6 | 24063831 | 24072963 |
XM_021600779.2 | False | 2082 | mRNA | 0.44 | 6 | 24063832 | 24069685 |
TU378440 | False | 2445 | TUCP | 0.43 | 4 | 24063831 | 24069676 |
TU378441 | False | 1652 | lncRNA | 0.41 | 2 | 24067561 | 24069676 |
TU378443 | True | 1737 | lncRNA | 0.40 | 2 | 24067561 | 24069761 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
msgn1 | LOC106608038 | coding | upstream | 715 | 24061677 ~ 24063116 (+) |
LOC110522407 | gen1 | coding | upstream | 3406 | 24052548 ~ 24060425 (+) |
LOC110522408 | LOC106608020 | coding | upstream | 29557 | 24024934 ~ 24034274 (+) |
acp1 | NA | coding | upstream | 184244 | 23866740 ~ 23879587 (+) |
si:ch211-225h24.2 | tdrp | coding | upstream | 262324 | 23778611 ~ 23801507 (+) |
tulp4a | tulp4 | coding | downstream | 9892 | 24082855 ~ 24138549 (+) |
tmem181 | tmem181 | coding | downstream | 65996 | 24138959 ~ 24148337 (+) |
syne1a | syne1 | coding | downstream | 111002 | 24183965 ~ 24396666 (+) |
zbtb2b | zbtb2 | coding | downstream | 361172 | 24434135 ~ 24443445 (+) |
trnal-uaa | NA | coding | downstream | 572261 | 24645224 ~ 24645306 (+) |
G334325 | NA | non-coding | upstream | 11758 | 24051711 ~ 24052073 (+) |
G334313 | cssa06h1orf115 | non-coding | upstream | 39340 | 24018489 ~ 24024491 (+) |
G334312 | NA | non-coding | upstream | 46627 | 24016737 ~ 24017204 (+) |
G334311 | NA | non-coding | upstream | 49946 | 24013668 ~ 24013885 (+) |
G334162 | NA | non-coding | upstream | 132575 | 23930888 ~ 23931256 (+) |
G334369 | serac1 | non-coding | downstream | 82758 | 24155721 ~ 24159410 (+) |
G334375 | NA | non-coding | downstream | 93488 | 24166451 ~ 24183626 (+) |
G334414 | NA | non-coding | downstream | 182547 | 24255510 ~ 24256286 (+) |
G334417 | NA | non-coding | downstream | 193050 | 24266013 ~ 24266674 (+) |
G334116 | NA | other | upstream | 229409 | 23833821 ~ 23837875 (+) |
ccdc167 | ccdc167 | other | upstream | 315560 | 23745535 ~ 23748393 (+) |
G333079 | smyd2 | other | upstream | 1105635 | 22955879 ~ 22958196 (+) |
G332507 | NA | other | upstream | 1470469 | 22592930 ~ 22593362 (+) |
G332458 | LOC106584613 | other | upstream | 1564835 | 22498500 ~ 22498996 (+) |
G334475 | NA | other | downstream | 344619 | 24417582 ~ 24418946 (+) |
G334473 | armt1 | other | downstream | 347151 | 24420114 ~ 24422731 (+) |
LOC110522376 | sash1 | other | downstream | 1978090 | 25761890 ~ 26057813 (+) |
G336464 | NA | other | downstream | 2820172 | 26892229 ~ 26894837 (+) |
LOC110522355 | plekhg1 | other | downstream | 3103418 | 27054628 ~ 27185449 (+) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
rainbow trout (Oncorhynchus mykiss) | G220942 | NA | non-coding | NC_048567.1 | CM023221.2 | 7648746 ~ 7649072 (-) |