Gene
RNA
| Item | Value |
|---|---|
| gene id | tulp4a |
| gene name | tulp4 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048568.1 |
| NCBI id | CM023222.3 |
| chromosome length | 46841314 |
| location | 24082855 ~ 24138549 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| tulp4 | Predicted to be involved in protein ubiquitination. Located in cytoplasm. |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036975984.1 | False | 9680 | mRNA | 0.50 | 14 | 24082855 | 24138549 |
| XM_036975985.1 | False | 9653 | mRNA | 0.50 | 14 | 24082855 | 24138549 |
| TU378447 | True | 3779 | lncRNA | 0.42 | 2 | 24134554 | 24138548 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-51e12.7 | NA | coding | upstream | 9892 | 24063831 ~ 24072963 (+) |
| msgn1 | LOC106608038 | coding | upstream | 19739 | 24061677 ~ 24063116 (+) |
| LOC110522407 | gen1 | coding | upstream | 22430 | 24052548 ~ 24060425 (+) |
| LOC110522408 | LOC106608020 | coding | upstream | 48581 | 24024934 ~ 24034274 (+) |
| acp1 | NA | coding | upstream | 203268 | 23866740 ~ 23879587 (+) |
| tmem181 | tmem181 | coding | downstream | 410 | 24138959 ~ 24148337 (+) |
| syne1a | syne1 | coding | downstream | 45416 | 24183965 ~ 24396666 (+) |
| zbtb2b | zbtb2 | coding | downstream | 295586 | 24434135 ~ 24443445 (+) |
| trnal-uaa | NA | coding | downstream | 506675 | 24645224 ~ 24645306 (+) |
| utrn | LOC106608002 | coding | downstream | 509476 | 24648025 ~ 24989137 (+) |
| G334325 | NA | non-coding | upstream | 30782 | 24051711 ~ 24052073 (+) |
| G334313 | cssa06h1orf115 | non-coding | upstream | 58364 | 24018489 ~ 24024491 (+) |
| G334312 | NA | non-coding | upstream | 65651 | 24016737 ~ 24017204 (+) |
| G334311 | NA | non-coding | upstream | 68970 | 24013668 ~ 24013885 (+) |
| G334369 | serac1 | non-coding | downstream | 17172 | 24155721 ~ 24159410 (+) |
| G334375 | NA | non-coding | downstream | 27902 | 24166451 ~ 24183626 (+) |
| G334414 | NA | non-coding | downstream | 116961 | 24255510 ~ 24256286 (+) |
| G334417 | NA | non-coding | downstream | 127464 | 24266013 ~ 24266674 (+) |
| G334441 | NA | non-coding | downstream | 162347 | 24300896 ~ 24348001 (+) |
| G334116 | NA | other | upstream | 248433 | 23833821 ~ 23837875 (+) |
| ccdc167 | ccdc167 | other | upstream | 334584 | 23745535 ~ 23748393 (+) |
| G333079 | smyd2 | other | upstream | 1124659 | 22955879 ~ 22958196 (+) |
| G332507 | NA | other | upstream | 1489493 | 22592930 ~ 22593362 (+) |
| G334475 | NA | other | downstream | 279033 | 24417582 ~ 24418946 (+) |
| G334473 | armt1 | other | downstream | 281565 | 24420114 ~ 24422731 (+) |
| LOC110522376 | sash1 | other | downstream | 1912504 | 25761890 ~ 26057813 (+) |
| G336464 | NA | other | downstream | 2754586 | 26892229 ~ 26894837 (+) |
| LOC110522355 | plekhg1 | other | downstream | 3037832 | 27054628 ~ 27185449 (+) |
