zbtb2b (zbtb2)


Basic Information

Item Value
gene id zbtb2b
gene name zbtb2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 24434135 ~ 24443445 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600764.2
CGAAAATGCAAATGCAGTCACGATTGTAGACTACGTTAAACGTTATCTGTttgtgtgggggtggggtgggcgACCTACGGCTATTTTCCCCTACATCGGTTTGTTTAACGTGCCCCAACCGGagattgaataaattatcatACAGTGCTCGCCCTCTATAGTCCTTTTCGTTTAGCTGTAACGAGGTGGATACAATTCTCTATTCACAGTGACACACGGCGGTTACGGTTCCCTTCCCAAAGAGAATTCGTCACGGCGCCCCGTCCGTTAAGCGAACTGCTGTTTTTAAGTGCCCTACATAGTCATGTGATTGTAACGTAACCCGACCGGAAAACACCGACGACCATCGCTACCAATGCTTCTTGAGAGGAACAGAGCAGCTGCAAGCCCAACGGACAAGTCCTCCggtaacaaacaacaacacgactAACTCCACGGATTCAAGGCAAGCAGAGTAGAAAGGTTGAAGAATGGAGTTGGCCAACCATGGTCTTATCCTCCTGCAGCAGCTCAACGCTCAGAGGGAGTTTGGCTTCCTGTGTGACTGTACCATCGCCATCGGAGACGTCTTCTTCAAAGCCCACAAGGCCGTGCTGGCCGCCTTCTCAAACTACTTCAGAATGCTCTTCATACACCAGGACAGTGACTGTGTCCGCCTGAAGGCTGCCGACATCCAGCCAGACATCTTCAGCTACCTCCTCAACCTGATGTACACAGGGAAGCTGGCCCCTCAGCTCATCGACCCAGCCAGGCTGGAGCAGGGGGTCAAGTTCCTCCACGCCTACCCCCTCCTCCAGGAGGCCAGCCTGGCCAGCCAGACATCCTTCTCCCACCCAGAGCCCAGCCTGCCCCTCTCTACTTCCCTCTTTGGCATCCAGATCTCCGACAAGCAGGTTGCGCTGTCCGGCAGGCTGCCCATCCGGCGCCAGCTCTCCTCGCCTTTTGACCTGGACAGCCTCCCTGACAGGAAGTATCCGTCCACGTCTGCTGTAACAGCGGCATTCACCAACCATGCGTCCAAGCTGGACTCTTCGTTTCAGGAAATGGTGGAGGCTTCGACCAGCGGTCAACGGGCCTCGTATGAGGAGCATGGAGGGAACACCCCGACAGGAGAGGCGCCCTCCTTGGGTAGCTCCAACACCATTCTCCATGTGAAGCCGAGCATCATGAAGAGGAATGCCTCCTTCAGGAAGCACTACTCCTGCCACCTGTGTGGCAGCCGCTTCAACCAGAGGAGCCTGTTGAGGGAGCACCTCCTGCAGCACAGCCTGGCCCGGCTCCCTCTGGTGGCCAAGCCCAGCGGTGCACACTCACCTGTCCTCCCAGGAGGAGGAGCAGCCACCACACCAGAGGTAGAGGAAGTACTGCTAAGGGGAGTTGGAGAACGGTCCGCTGCCATGACAGTTGAGATGCTTAGTGACAGCGAGCAAGCACCGCCCTCTGGTTTCAGCATGGACTCTCCCAGAGCAGAGTTGTCGGGGTGGGCGACCGGGTGTCAGTCCCAGGCCGACACCCCACCTCCATCGGACATTGCGGATATCGACAACTTGGAGAGTGCTGACCTGGACCGCGAGGTGAAGCGCAGGAAGTACGAGTGCGCCACCTGCGGACGCAAGTTCATCCAGAAGAGCCACTGGCGAGAGCACATGTACATCCACACGGGAAAGCCCTACAAGTGCAGCGCCTGCGGCAAGAGCTTCTGTCGTGCCAACCAGGCGGCTCGCCACGTGTGCCTGACCCAGGGTGCCGACGCCTACACCATGGTGGACCGGCAGAGCATGGAGCTGTGTGCCGCAGGGGACGACACCAGCCAGATGGAGGCGCTGTTCCTAGGCTCGGCCAGGCCCTACAAGTGTAATGTTTGTGAGACCACCTTCTCCAGCCCCAACGAGGTCATCAAGCACCTGTGCTTCAGCCAAGGGGCTCTAGCTGGCCTGCAGGGGCAGTCAGGGGTGCGGCTGCTGCAGGGGGAGGAGTTTCCCAAAGACGAGGGCTCTGATTCGTCCGGCGCCGCCACCCTCATTACGGCCATAAAAACTGAGCAGATCTTGGTGGAGTAGGTCCACAGCACCAGAACCAGTCTTATATTTTTATTctcttatatacagtatgtttattATTTCCTTTGGTAAATGATGGTCAGTAGTTAAGCTAAAGATTTAGTTAGAGGTATATAAGGAGGGGTTTTATATCTACTGAAAATGCTTCCTCAGGTTTATTTAACAGCAAAGCCAGAGACTTGGACTTGTTTCAGTAGAAACTGTCTATTAAGTGTCCATGTGAAAACCACACACTGTACTAAGTCTTCTTTCCAACATGACGTTGCATTTGTCCGCCCATTTGTTCTCCTATGCATATGTCACTgaccaattggcaaaatagtATGTTGCTATATGTTTCTCAAAATATGTGCTACAGTTGAGTTCGTGGTGTAATTATGACTAGGGCTTTGTCGTATTCTCAGTCTCTTTCTGGTGCTTCATTTACATAGGTCTGTCACATTGGTTTCTGTTACTTAATTTAAAGTGGCCGTTGGCTGTGGTCGAGCCTCTCACTCAGCTTTTAGCTCCAGACAGGAACAGGAAGTTGAGAGAGAGTTCCGGAGGAAGTGATGTTTCTCTACAATCAAATGGTGCAGGAGATACCAGGGGAAGCAACAGGCAGGCAGGTGTAGACCGAATGGTGGTCTCAACACATCTGCTGTAAAATAAAACGTATCTCCTTTTCCAAAGTGTTATCTCCTGCAGTATACTGATGAAATAAGTATATGCCCAGTCCAGAATCAACCTCATTCCATGGCCTATTAGGTCCAGTCCAGTAGGCTGTGTCTTCCTTTGGCAGTTTTCAGTAACCTTGTAAGCAGAACATGTACCATGACATTTCATAATTCCGTGGTATAAATTCCCTTCTGTACATTGTTTTGAACAGCCATTTTGTTACTTTTTGTGCAACGTGTGCCAACTGTGGGTATGAAAAGAAGCACAATTGCCATAGACGAAACAGGGCAATCTAGGCCCAAATTAAGGATTGTGTTGGTTACTCCAACAGAGGCCTCAAAGCAGAAGCAAGCACTGTAGCTTTATAGGTGATGTTTACAGTCGTGCCATTTTTATAAACCTTTGTTTATTTTAAATAGCTACTATCTGTGCATTTTAAACACATTTATGTTATCATATTTTGATGCCTACATGTATTGAAGGGAGTTTTCAATTCTGTACAATATTGTACACCTTGCCAATTGATGATCATTTgcttgaatttgttcttaaagacCTTATTTTGTGTTGGATATACCTTTCTAATTTTATATACAATGCTATATTTACAAATCATATTTTTTATTGCAAAGTTTGTATATTACTAATTGGTTTCCAATCTAGAAAACAATTGATTTAGTATAGTGaaggtgtatgtatgtatatttgtTGTCAATCTCTTTCCATTCAAGGCCTTGGTGTTACTGACTTCTAGTATGATATTTATCTTAATCTGCTGCGGCTTCATTTGCAGTTACTCTTTCCCTCTGTTTGTACAGTACGGTTTGGTGGCAGGGAGGGTCAGGCTCAGTTCCATTTTGACCCCTAGCCCAGTCTCCTCTAGCTTCGTTCTATCCTTTTGGATCTCATAGACTAGCTGAAAGAAAAATGTCCATCCATATAGTAAATATGGCTTTATGGTTTATGCCTATCCTATCTAGACTCTATCCAGGGTGGGGCCAACTGGGACTGGGGTTCCATACTACTTTCGCACAAATGGAGTCTTCATGCTGAGCAAATTAGACATAGTTCAGTCACATTTCCATTGGCTTAAAGACACAATATAAAAGTGAGTGTTACATGGGGGAAGGACTCCTATTTATCTCGTGACTCACGCTGTGTTATAGTATATTCAGGCATTGTGAAGTGAATACTACTGAAGTGTACTTCTCAGAGGTCAACATATAGCACGTTTCTCCTCATCAGTTAGTCTCTGGATTCTCCCTGCTGAGCTCAAATTGTACAATGTTCAACCACATTGGTCGTAGGTGTAAACTAACAGCTTAACGTCTTTCCCTGTGTCAATTATAAAATGTGTATTTATGCAAGCGGTTGGTCTTTTCTGTGTTGGGATATTTTTGGAAACAAGTTTCAGGGGTAATGGGGAAGCTGGGCGAGGGGAAGTCCCCGACCTGTGATCCTGGAGCGTTCACACTGCTGCCCTCCCAAAGCTCAGTTGAACATGTACTGTGATATCTCTGTGTTCTCAGGAACGTGAGTTAGTCTTCTGtgtaaataataaagaaaactatTTTACATTTTCACAGTGAAGAATGAACAATTAAAGAGATGTTTTGCAGAATTATGGCATGGTTAATTATttcttattcagctgtgttcaTCCCAAGAATACATGCATGTTTGATTTCAGATGTTTTACTCATCTTTTGACTTTGGTTAAATAAACTCTAGACATCGCTACAGAGGGTTTCCCAGTCTTTCATCAACCCCATCCAAATGAACACGTGGTTGTTGATTAAATCGTGGATTGGTGTTGGGCTAATGTCAATGTATGGGAATTAGTTGATCCTGAAGATGTTACAAGATGTCTCCACTTCATAAAAGGGTTTTGGCTCCTCTCCCTCCTTATAGGACAGTGGCGTTGTTGTATTACTCTGTAGGGTGGGGAAGACTTGGGTCTGTAATGTCATTTCTGCATTCAATTCAAATTCAGAGTTTTACTCCAGACTTTTCTAGTTAATAACTCACAACAGACTCTAAAACATTCATGATTTACAGAGCTGTTCACCGTTTTAACTGGCTTGTTCCATGACAACTTGGCCCAGGCAAGTTATACTAGATAGAGCAGTGGGACGGAAGtgtaaaggcccaatgcagtttAGTGTTTGAAAAGACCACTTGAAATTACAACCAGTTTTTGGGGGATGGAGTTTTGGtcaccaggcagtaaattagttaatagaccgataacaaagagagttccaaacctctctgccaataatagcAAGTTTTCagatttcccctccccactcagaccactcccagacagtccaagATAGATTCTGTTTGAGAAATTGctatttgaccattttaatttaaaacaatcacagtaaggtacttaattgttagc
>TU378615
CTTTCCATTCAAGGCCTTGGTGTTACTGACTTCTAGTATGATATTTATCTTAATCTGCTGCGGCTTCATTTGCAGTTACTCTTTCCCTCTGTTTGTACAGTACGGTTTGGTGGCAGGGAGGGTCAGGCTCAGTTCCATTTTGACCCCTAGCCCAGTCTCCTCTAGCTTCGTTCTATCCTTTTGGATCTCATAGACTAGCTGAAAGAAAAATGTCCATCCATATAGTAAATATGGCTTTATGGTTTATGCCTATCCTATCTAGACTCTATCCAGGGTGGGGCCAACTGGGACTGGGGTTCCATACTACTTTCGCACAAATGGAGTCTTCATGCTGAGCAAATTAGACATAGTTCAGTCACATTTCCATTGGCTTAAAGACACAATATAAAAGTGAGTGTTACATGGGGGAAGGACTCCTATTTATCTCGTGACTCACGCTGTGTTATAGTATATTCAGGCATTGTGAAGTGAATACTACTGAAGTGTACTTCTCAGAGGTCAACATATAGCACGTTTCTCCTCATCAGTTAGTCTCTGGATTCTCCCTGCTGAGCTCAAATTGTACAATGTTCAACCACATTGGTCGTAGGTGTAAACTAACAGCTTAACGTCTTTCCCTGTGTCAATTATAAAATGTGTATTTATGCAAGCGGTTGGTCTTTTCTGTGTTGGGATATTTTTGGAAACAAGTTTCAGGGGTAATGGGGAAGCTGGGCGAGGGGAAGTCCCCGACCTGTGATCCTGGAGCGTTCACACTGCTGCCCTCCCAAAGCTCAGTTGAACATGT

Function

symbol description
zbtb2 Enables DNA-binding transcription repressor activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and identical protein binding activity. Involved in negative regulation of transcription by RNA polymerase II. Predicted to be active in nucleoplasm.

NR:

description
PREDICTED: zinc finger and BTB domain-containing protein 2

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600764.2 False 5127 mRNA 0.47 3 24434135 24443445
TU378615 True 787 lncRNA 0.44 1 24441754 24442540
Loading

Neighbor

gene id symbol gene type direction distance location
syne1a syne1 coding upstream 37469 24183965 ~ 24396666 (+)
tmem181 tmem181 coding upstream 285798 24138959 ~ 24148337 (+)
tulp4a tulp4 coding upstream 295586 24082855 ~ 24138549 (+)
si:ch211-51e12.7 NA coding upstream 361172 24063831 ~ 24072963 (+)
msgn1 LOC106608038 coding upstream 371019 24061677 ~ 24063116 (+)
trnal-uaa NA coding downstream 201779 24645224 ~ 24645306 (+)
utrn LOC106608002 coding downstream 204580 24648025 ~ 24989137 (+)
LOC118964455 NA coding downstream 659349 25102794 ~ 25104074 (+)
LOC110522385 LOC106607999 coding downstream 662743 25106188 ~ 25127317 (+)
LOC110521065 LOC106607993 coding downstream 684178 25127623 ~ 25135539 (+)
G334482 NA non-coding upstream 200 24433484 ~ 24433935 (+)
G334470 NA non-coding upstream 21363 24408923 ~ 24412772 (+)
G334455 NA non-coding upstream 83687 24349692 ~ 24350448 (+)
G334441 NA non-coding upstream 86134 24300896 ~ 24348001 (+)
G334417 NA non-coding upstream 167461 24266013 ~ 24266674 (+)
G334485 NA non-coding downstream 1004 24444449 ~ 24475335 (+)
G334511 NA non-coding downstream 66456 24509901 ~ 24510129 (+)
G334515 NA non-coding downstream 72187 24515632 ~ 24515960 (+)
G334521 NA non-coding downstream 75706 24519151 ~ 24519602 (+)
G334520 mthfd1l non-coding downstream 76225 24519670 ~ 24539627 (+)
G334473 armt1 other upstream 11404 24420114 ~ 24422731 (+)
G334475 NA other upstream 15189 24417582 ~ 24418946 (+)
G334116 NA other upstream 599713 23833821 ~ 23837875 (+)
ccdc167 ccdc167 other upstream 685864 23745535 ~ 23748393 (+)
LOC110522376 sash1 other downstream 1607608 25761890 ~ 26057813 (+)
G336464 NA other downstream 2449690 26892229 ~ 26894837 (+)
LOC110522355 plekhg1 other downstream 2732936 27054628 ~ 27185449 (+)
LOC118964415 LOC106608050 other downstream 3147407 27537262 ~ 27601564 (+)
G339660 NA other downstream 4415271 28858716 ~ 28859155 (+)
G334483 NA non-coding upstream 6251 24435200 ~ 24435503 (+)

Expression

zbtb2b(zbtb2) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
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zbtb2b(zbtb2) Expression in each Bioproject

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zbtb2b(zbtb2) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network