LOC118964455


Basic Information

Item Value
gene id LOC118964455
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 25102794 ~ 25104074 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005051502.1
CAACTGAGTGGACATAAAGTGGAAAGAGGGGGAAATAACTCCCAAGATGCAGCAGGACTGCTGCAGGGTCTTTGTAATGCACATTTGATAGTTATATTTTCAATAATGAATGGTAAGCTGTTATGTGACAACTAGGTCAAAAACTCTATTTCATTTTTTGGTGTAGATGGCCAAGAAAGTTGCACAGAACTTCCAACATCCCCTCCCACATTGATATGGAACCTTCTGTGAAAAGAAATGGCTGAGGATATACTAAAAATGTCTGTTCAACAAAGCCAACAACTGCTTCATGTGTGCCACTGATAAAGAACCTGGATGTGGCCCAAagactgactggattgaatgttttgcatgtcaacgGTGGTTCCATGTGCTGTGCCTAGGAATGAAGACAAAATAGTTCAACAGAGTAAAGAATACAAACTGGAAGTACAGtttgttgttgaaaatgtatgctataccccatccacactgaagaggctctgaaatgtacatcaaccagggataaagagaaagTTAACACTGAAATGTTTCATACTTATTTGAAGTTAAGTGTCTGGTGACATGTTGGAAAATACTACAAATCTACAATTTCTGTTTAATTTGtcaatattacatttttattcattGATTTTCTGGCCACCATTACTGTGGTTacatgttcagtatatgtatcgACCAACAAACCCACTGCAGCCTACCTCactagctcactctccatccctgctttggATAATTAATAGCATGACTCTCGTACTTTGCCCTTTTCCTTTATGGTTGATATTAACGAAGAAAGGAGATATTATCTGTTTCTCTCCTATTGTTAAAAACAgtggaaaaataaaaaaacggaaaAGAAGTACTTCGAACTACCAATTATTATAGATAAATATCAAAGAAAAGGGtaaacacaacactggactgaacCTCCTAATTGTCAAACTAATATTAATGTACAACAATATAGAAGATACATGACTAGAGGTTATGCAATATGGGTGTATATCCACTGCACGCTTCTTAGGTGTGTA

Function

NR:

description
uncharacterized protein LOC110503783

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005051502.1 True 1031 mRNA 0.37 3 25102794 25104074
Loading

Neighbor

gene id symbol gene type direction distance location
utrn LOC106608002 coding upstream 113657 24648025 ~ 24989137 (+)
trnal-uaa NA coding upstream 457488 24645224 ~ 24645306 (+)
zbtb2b zbtb2 coding upstream 659349 24434135 ~ 24443445 (+)
syne1a syne1 coding upstream 706128 24183965 ~ 24396666 (+)
tmem181 tmem181 coding upstream 954457 24138959 ~ 24148337 (+)
LOC110522385 LOC106607999 coding downstream 2114 25106188 ~ 25127317 (+)
LOC110521065 LOC106607993 coding downstream 23549 25127623 ~ 25135539 (+)
LOC110522384 LOC106607998 coding downstream 36278 25140352 ~ 25155796 (+)
LOC110522380 LOC106607995 coding downstream 62917 25166991 ~ 25209400 (+)
LOC110522381 LOC106607994 coding downstream 105648 25209722 ~ 25240161 (+)
G335433 NA non-coding upstream 42739 25059761 ~ 25060055 (+)
G335431 NA non-coding upstream 51176 25051320 ~ 25051618 (+)
G335430 NA non-coding upstream 52085 25050453 ~ 25050709 (+)
G334768 NA non-coding upstream 72034 25030474 ~ 25030760 (+)
G334750 NA non-coding upstream 96869 25005327 ~ 25005925 (+)
G335528 NA non-coding downstream 130825 25234899 ~ 25235204 (+)
G335543 NA non-coding downstream 158651 25262725 ~ 25263018 (+)
G335544 NA non-coding downstream 159543 25263617 ~ 25263826 (+)
G334473 armt1 other upstream 680063 24420114 ~ 24422731 (+)
G334475 NA other upstream 683848 24417582 ~ 24418946 (+)
si:ch211-51e12.7 NA other upstream 1033118 24063831 ~ 24072963 (+)
G334116 NA other upstream 1268372 23833821 ~ 23837875 (+)
ccdc167 ccdc167 other upstream 1354523 23745535 ~ 23748393 (+)
LOC110522376 sash1 other downstream 946979 25761890 ~ 26057813 (+)
G336464 NA other downstream 1789061 26892229 ~ 26894837 (+)
LOC110522355 plekhg1 other downstream 2072307 27054628 ~ 27185449 (+)
LOC118964415 LOC106608050 other downstream 2486778 27537262 ~ 27601564 (+)
G339660 NA other downstream 3754642 28858716 ~ 28859155 (+)

Expression

LOC118964455 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 0.6.
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LOC118964455 Expression in each Bioproject

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LOC118964455 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 15.
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Co-expression Network