LOC110522377 (LOC106607986)


Basic Information

Item Value
gene id LOC110522377
gene name LOC106607986
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 26059992 ~ 26177817 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976014.1
ACAACTTCATTGGCAGAAATAGTCCGAGAGAACAGACGAGAGAGACCGAACGGAGACGAAAACCGAGTGCGCAAATAACTCGTGGCGGCGGCGGGTGCCTGCGTTTCCTAATAGGTGTCCGTTTCAAATAATATCAAAGCAAGAAGTTTCACTTTCCACAGGCGGATGGGTGACTATCGCTCTCGGCGGCGCTTTGTGAGGAGGAGATGATGAAGAATTTCAGCAACAGTCCCCTTCACAATAACCAGACTCCAAACCACATTAGAGATTGGAACAACAAAAAGTTTGGTTTTCTCTCGGCGGTTCTGTTACGTTTTTCCCTGCGAGGTTATGGTTTTTGCATGGCTAGTCTATTCATCTTCTGTTTTGGGTCTCTGTTTTACCAGTTGAACGGAGGACCCCCCAACATTCTACTGGACATCCGACAGTATCTCGGAGAATCCACATATCTCGATGACCACGGACCCCCAGCTCCCCGCGTGCTGCCGTTCCCCAGTCAGGTGGTGTATAATCGTGTGGGGAAGTGTGGCAGCAGGACGGTAGTCATCCTACTAAGGTTACTGGCAGAGAGACACCAGTTCAACCTGGTCTCCTCAGACATCCACAACAAGACACGCCTCACCAAACATGAACAGGTGGACCTTATGAGGAACATCAGCAACATCCCTCAGCCTTTCCTGTACACCAGACATGTCCACTTTCTCAACTTCACCCGgtTCAGGATAGAGCAGCCCGTCTACATCAACATCATACGGGACCCCATTAACCGTTTCCTCTCCAACTACTTCTTCCGACGTTTCGGGGACTGGAGGGGGGAGCAGAATCACCTCATCCGAACACCAGGGATGAAAGGTGACGAGAGATACCTGgaCATCAATGTGTGCATCCTGGAGAATTACCCAGAATGCTCCAACCCCAGACTCTTCTACATCATCCCATATTTCTGTGGACAGCACCCCCAGTGCAGgGAGCCGGGACAATGGGCACTGGAGAGGGCCAAACAGAACGTTCTAGAGAACTTCCTTATTGTGGGGATCCTAGAGGAGCTGGAAGATGTCCTGCTTCTTCTAGAGAGACTGTTACCTCACTACTTTACTGACGTACTCAACATCTACAAGAGCCCAGACTACAGGAAGATGGGGAACATGACTGGTACGGTACGtaaacacacacccactctgGAGGCCCTTCAGGTTCTGTACCACCGCATGCGCTACGAGTACGACTTCTACAACTTCATCCGAGACCAGTTCCACTTGATGAAGAAGAAGATTGGCCTCAAATCGGTCCCCCGACCACCTTCCCACCAGGCCTCCTTCCTAAGAGACCTCTCCCTCCGAACCCCAGAGCCCCTGGATGAAGATGAGGAGCTGGAGACCGACCTGGAGGATGCCAACAGCTGGTTGGTCCAGCCCTGACCAATGCAGTGGTGACTGAGGACTTTACTTGCATCTGGTTGGCTGGAGGTGGCATGATAAAGGGGCGGGGGATGTGCCCTGTCTGTCAACATTCCCAGGAGGACGATTGGTTGGGGGTGTGTGGATCCTGATGCCTGTGTTTTTACAGGCTACATATTCCGTTCATCTTGGACTCTCTACTCACCGCTGAGAACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGAACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCGGACTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGAACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGAACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGAACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGACTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCGGACTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCGGACTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCGGACTCTCTGCTCACCGCTGAGGACCTTGGGAGCGGGCTCGGACTCTCTGCTACCACTGAGGACCTTGGGAGTGGACTCGGACTCTCTTCTACCACTGAGGACCTTGGGAGTGGACTCGGACTCTCTGCTACCACTGAGGACCTTGGGAGTGGACTCGGACTCTCTGCTCACCGCTGAGGACCTTCGTTGTGGGCGGATGGATGGACGAACTGACATATTTAAAGATTGACTACAATAATGGATGGGGGGGGGTTGCTTTAAAAAGCTCACTTTGCTTGTTTTaaggttttatttttgttttgttggttTGAGGCCGTCCTGTTTGGGTTATCTCCAGGTGAGATAAGACAAAAGGGATTTGGACCTATGAACATTTTAAATGTTGAGGGGAGGGCTACATCTTAGGATCAGGAAAAATTCAGACACCAACATAGGTGCAGGGATGATGGGGGTGAAGGAGCGTGTTGAGGAGTGAGAGAgcagggaagagacagagatgatGGGGGTGAAGGAGCGTGTTGAGGAGTGAGAGAGCAGGGAAGAGACGGGGATGATGAAATTGGAGGGGTTGTGTGTAACAGGTCTACTTTTAGTGCttgaccactctgtctctccctgtctctcccagcctCCTTTTCTCCCTTTATTTtcctcttattttctctctctccctcacactctgcCTGCTTTAAGGgcccttattttctctctctccctcacactctgcCTGCTTTAAGGgcccttattttctctctctccctcacactctgcCTGCT
>XM_036976015.1
tgtcaggtggatggattatcttggcaaaggagaaatgctcactaacagggagGTGCTGCCGTTCCCCAGTCAGGTGGTGTATAATCGTGTGGGGAAGTGTGGCAGCAGGACGGTAGTCATCCTACTAAGGTTACTGGCAGAGAGACACCAGTTCAACCTGGTCTCCTCAGACATCCACAACAAGACACGCCTCACCAAACATGAACAGGTGGACCTTATGAGGAACATCAGCAACATCCCTCAGCCTTTCCTGTACACCAGACATGTCCACTTTCTCAACTTCACCCGgtTCAGGATAGAGCAGCCCGTCTACATCAACATCATACGGGACCCCATTAACCGTTTCCTCTCCAACTACTTCTTCCGACGTTTCGGGGACTGGAGGGGGGAGCAGAATCACCTCATCCGAACACCAGGGATGAAAGGTGACGAGAGATACCTGgaCATCAATGTGTGCATCCTGGAGAATTACCCAGAATGCTCCAACCCCAGACTCTTCTACATCATCCCATATTTCTGTGGACAGCACCCCCAGTGCAGgGAGCCGGGACAATGGGCACTGGAGAGGGCCAAACAGAACGTTCTAGAGAACTTCCTTATTGTGGGGATCCTAGAGGAGCTGGAAGATGTCCTGCTTCTTCTAGAGAGACTGTTACCTCACTACTTTACTGACGTACTCAACATCTACAAGAGCCCAGACTACAGGAAGATGGGGAACATGACTGGTACGGTACGtaaacacacacccactctgGAGGCCCTTCAGGTTCTGTACCACCGCATGCGCTACGAGTACGACTTCTACAACTTCATCCGAGACCAGTTCCACTTGATGAAGAAGAAGATTGGCCTCAAATCGGTCCCCCGACCACCTTCCCACCAGGCCTCCTTCCTAAGAGACCTCTCCCTCCGAACCCCAGAGCCCCTGGATGAAGATGAGGAGCTGGAGACCGACCTGGAGGATGCCAACAGCTGGTTGGTCCAGCCCTGACCAATGCAGTGGTGACTGAGGACTTTACTTGCATCTGGTTGGCTGGAGGTGGCATGATAAAGGGGCGGGGGATGTGCCCTGTCTGTCAACATTCCCAGGAGGACGATTGGTTGGGGGTGTGTGGATCCTGATGCCTGTGTTTTTACAGGCTACATATTCCGTTCATCTTGGACTCTCTACTCACCGCTGAGAACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGAACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCGGACTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGAACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGAACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGAACCTTAGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGACTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCTGATTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCGGACTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCGGACTCTCTGCTACCACTGAGGACCTTGGGAGTGGGCTCGGACTCTCTGCTCACCGCTGAGGACCTTGGGAGCGGGCTCGGACTCTCTGCTACCACTGAGGACCTTGGGAGTGGACTCGGACTCTCTTCTACCACTGAGGACCTTGGGAGTGGACTCGGACTCTCTGCTACCACTGAGGACCTTGGGAGTGGACTCGGACTCTCTGCTCACCGCTGAGGACCTTCGTTGTGGGCGGATGGATGGACGAACTGACATATTTAAAGATTGACTACAATAATGGATGGGGGGGGGTTGCTTTAAAAAGCTCACTTTGCTTGTTTTaaggttttatttttgttttgttggttTGAGGCCGTCCTGTTTGGGTTATCTCCAGGTGAGATAAGACAAAAGGGATTTGGACCTATGAACATTTTAAATGTTGAGGGGAGGGCTACATCTTAGGATCAGGAAAAATTCAGACACCAACATAGGTGCAGGGATGATGGGGGTGAAGGAGCGTGTTGAGGAGTGAGAGAgcagggaagagacagagatgatGGGGGTGAAGGAGCGTGTTGAGGAGTGAGAGAGCAGGGAAGAGACGGGGATGATGAAATTGGAGGGGTTGTGTGTAACAGGTCTACTTTTAGTGCttgaccactctgtctctccctgtctctcccagcctCCTTTTCTCCCTTTATTTtcctcttattttctctctctccctcacactctgcCTGCTTTAAGGgcccttattttctctctctccctcacactctgcCTGCTTTAAGGgcccttattttctctctctccctcacactctgcCTGCT

Function

NR:

description
uronyl 2-sulfotransferase-like

GO: NA

KEGG:

id description
K03193 UST; dermatan/chondrotin sulfate uronyl 2-O-sulfotransferase UST

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976014.1 False 3301 mRNA 0.52 8 26059992 26177817
XM_036976015.1 True 2874 mRNA 0.53 7 26137308 26177817

Neighbor

gene id symbol gene type direction distance location
LOC110522376 sash1 coding upstream 2179 25761890 ~ 26057813 (+)
LOC118964400 NA coding upstream 262837 25773001 ~ 25797155 (+)
LOC110522379 LOC106607987 coding upstream 460111 25580399 ~ 25599881 (+)
LOC110522378 LOC106607989 coding upstream 481161 25556661 ~ 25578831 (+)
LOC118964457 LOC106607989 coding upstream 510886 25546661 ~ 25549112 (+)
LOC110522374 mettl24 coding downstream 38584 26216401 ~ 26280564 (+)
LOC110522372 wasf1 coding downstream 149734 26327551 ~ 26465676 (+)
ak9 ak9 coding downstream 425579 26603396 ~ 26624669 (+)
ppil6 ppil6 coding downstream 447095 26624912 ~ 26642218 (+)
LOC110522366 cd164 coding downstream 473686 26651503 ~ 26667757 (+)
G335981 NA non-coding upstream 44531 26015199 ~ 26015461 (+)
G335857 NA non-coding upstream 251466 25808116 ~ 25808526 (+)
G335789 NA non-coding upstream 352997 25706784 ~ 25706995 (+)
G335782 NA non-coding upstream 365881 25693891 ~ 25694111 (+)
G335778 NA non-coding upstream 374258 25685518 ~ 25685734 (+)
G336098 NA non-coding downstream 91638 26269455 ~ 26282016 (+)
G336154 NA non-coding downstream 162120 26339937 ~ 26431304 (+)
G336221 NA non-coding downstream 311891 26489708 ~ 26490154 (+)
G336234 NA non-coding downstream 325480 26503297 ~ 26503561 (+)
G336244 NA non-coding downstream 336134 26513951 ~ 26514547 (+)
G334473 armt1 other upstream 1637261 24420114 ~ 24422731 (+)
G334475 NA other upstream 1641046 24417582 ~ 24418946 (+)
si:ch211-51e12.7 NA other upstream 1990316 24063831 ~ 24072963 (+)
G334116 NA other upstream 2225570 23833821 ~ 23837875 (+)
G336464 NA other downstream 715318 26892229 ~ 26894837 (+)
LOC110522355 plekhg1 other downstream 998564 27054628 ~ 27185449 (+)
LOC118964415 LOC106608050 other downstream 1413035 27537262 ~ 27601564 (+)
G339660 NA other downstream 2680899 28858716 ~ 28859155 (+)
G339693 NA other downstream 2736782 28914599 ~ 28915539 (+)

Expression


Co-expression Network