fig4a (fig4)


Basic Information

Item Value
gene id fig4a
gene name fig4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 26498514 ~ 26603349 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036976023.1
TGCTCAGGTCtcctgttttgttcagtgttctcgtATGCACTTGCTTTGTTGTTTTGCTATGAAGACCTTAAGTAAATATTCTGGATTTACCCTTACCTCtgcctgctgtgtttctctgcgCCTGGGTCCGAGTTCGTACTAGCACTAATGTCACACCTTCCAGCATTGGACAAATAGCACTCTAAGGCTTTGTCCGATTCCTTGAGGGTTATTACCTCGTGTTGATCACCAAGCGGAGGAAGATGGCCGACATTGGTGGTCACTCCATATACAAGATAGAGGATACTAACATGATCTACATCCCCAATGACTCAGTGAGGGTGACACATCCTGACGAGGCCAGATACGTGAGGATCTTTCAGAATGTGGACCTGTCCAGCAACTTCTACTTCAGCTACAGCTATGACCTGAGCCACTCCCTGCAGTACAACCTGACGCTGCTGCATAGCCCGTGTGACCCGGGCACAGTGGAGGAGGTGCACACACGGAGCAGCAGACAGCAGGACAGCTTCGACATCTTTGAGGACGAGGGCCTGCCCACACAAGTGTTCCACGGCCTCCAGAGTGAACCGTACGCCAAGTACGTGTGGAACGGCAAGCTCCTGGAGCGCGTCAAGGACACGGTGCATCCTGATTGGCTCATGTACATCATTCATGGCTTCTGTGGCCAGTCCAAGCTCCTGATCTACGGTCGTCCGGTTCATGTCACCCTCATCGCCAGGCGCTCCAGTAAATTTGCTGGCACCCGCTTCCTCAAGAGAGGAGCCAACTGCGAGGGTGACGTAGCCAATGAGGTGGAGACTGAGCAGATCATCCACGATGCGTCTGTGATGTCATTCACGGCAGGGAGTTACTCTTCGTACGTTCAGGTCAGGGGTTCTGTTCCCCTCTATTGGTCCCAGGACATCTCCACCATGATGCCTAAACCACCTATACGATTGGACCAGGCCGACCCCTATGCCCATGTAGCTGCCCTCCATTTTGACCAGATGCTCCAGCGGTTTGGCTCGCCCATCATCATCCTCAACCTCGTCAAGAAACGAGAGAAGAGAAAGCATGAGAAGATCCTCAGTGAGGAGCTCTTCCCTGCTGTAATCAACCTCAACCAGTTCCTCCCTCCAGAACACTGCATCGACTACATCGCCTGGGACATGGCCCGATACACCAagagtaaGCTGTATAACGTGCTGGACCGTCTTAGTATGATAGCAGAGAACGTGGTCAAGAGGACCGGCTTCTTCATCAACCGCTCTGACTTCTTCTGTCACACCCTCAGACCAGacgagagGTGGGGAGATCTTGGGGGAAGTCTCACCTCAAGTGGGCGTGTCCAGACAGGTGTGTTGAGGACGAACTGCGTGGACTGTCTGGACCGAACTAACACGGCCCAGTTCATGGTGGGGAAGTGTGCTCTGGCCTATCAGCTCTACGCTCTGGGCATGATTGACAAGCCCAAGCTGCAGTTTGACACGGACTGTGTTAGGCTGTTTGAGGAGCTGTATGAAGACCATGGGGACACCCTGTCTCTGCAGTACGGGGGCTCCCAGCTTGTCCACAGGGTGAAGACCTACCGGAAGATAGCCCCCTGGACACAGCACTCCAAAGACATCATGCAGACCCTGTCCCGCTACTATAGCAACGCTTTCTCAGatgCAGACCGGCAGGATGCCATCAACCTGTTTCTGCAGGTGTACCAGCCGTCAGAGTCTAAGCCTCACCTCTGGGAGCTGCCCACTGACTTCTACCTGCACCAGAGGAACTCTATGGCGTTGACTCACGACAGGCGCAGCTATACGTACTGGTGGTCAGAGGGGATCTTATCCTACCTGCCTCTGCCCTATGATGAAGTTCCCTGTGAGGAGAATATGAAgaaggtaggggtgaggagagtgaACCGTTACGACGAGAGCATTGATACCTACACAGAGTTCTTCAAACCCTACGAACTCACCTCCTTTGACGACACCTTCTGCATAGCTATGACCAACTCTGCACGgGAGTTGATGCCCAAGACGGTAGGAGTGGACCCCAGCCCCTTCACTGTGCGCAAGCCAGAGGAGACTGGGAAATCTGCTGTGATTGGtgctAAGAGCAGTAAGGAGGAGACGGTGGTCCAGAGGAAGACAGCGGCCagcgcccccccaccccccagtgaGGAACAGATCTCCAGCAGCTCAGAGGACGACTCCGAGGACGACCGCGACGATGACGGATCAGTGTCCCAACGCTCCACCCCCGTCAAACTACTAACCGAGTCTGGGGAGAGCGTCCGCACTCAGGAGGACTTCCTGCAACAGTCCATGAGAGAAACCTATGGACTCAACCTGGCCGCGCTCCCTGCCGAGGAGGACATGCTCATATATgagagGTTTGCCTATCTGGGTCAGAACCAGCACAAGTTGGAGAGAACCGAACCCTCAGTCCTGGAGAACGCCATCAACGTtgttccTGTGTCATGCTTTACGACTGACAGTATATACGAGGTGTCGTCTCCGCAGGTGGACAGGGACAACAGGGAGGTGTTTGAGGGCCACGTGCTAACTGGCCTTGGCCAGGTGAGATCACTGTGCCGAGAGGACATACTCATGTACAGAGAGTATATCAAGAACAGGTACATGTGATGTGAGAGGCTCcataaccatagaaatagaatgaatagaatggtcATCCCCATTaaagtcaatgatggcataatgggtggactggtggccattgtgagtgtacccataaggagcaaagcaggaagtaaaagcaggaagtgtgcGATCAATCTGTGATGTGATCTGTTAAGTCAACTCAACTGACATGACAAAAAAAATAGATTCCATTGTAAGAGCCACATCAGTTAGCATCATTTGAattaacattctacattaccatggaaattatTTAATCAACAGGCAGCCATTAcaagtgtacccatgagtttaccagtcataTTGCCAGGGTCAGAGATTCAaagcctgttctattcattctatttctatggccatAACCAACTCGCAACCATCGATCAACCACATCTCAACGTTGGATCAACCACGCTCTTGACCACAGCCCCATTACCTGCAAGGAGAGTGGATTGTGGTTTCATGGTATACAGTGGACTCCCAATCAAAGGCTTCTCAGGCTGATGAGATGACCGTTAGTGAATGTTTCCAGAAGAGGCAGGACAATATTCCTAGTCTGTTTTATGACTTCATATTTTTCAGTAGTTATTTTAGAGTGACAGCAGTAAAGGATGAAAACAGGTTATTTATTTCAGTTATTTTAGTCATGATCATGTATGGCTTCCAAGGTTAAACAAGTGTTTCAttgttttctttttctctctcttgccaTTTTAAACACatccctgttttttttttatgtagctTTTGAGTTTTACACACATTTAGCACAGCTGTCGTTTTTTCTGTTTGGATGTTGGACAAAATAAACGTATCATGTTTACAAAACTAA
>XM_021600720.2
TGACCGTGTGAGGACCCGTCTCAGCGGAAGTTTGTGACAGTCACCTGATCGAAACAAACGCATGATCAGGGAGGTGGTGCATTGCAAATTAGTTTGCTTTTCTGTATTTGGCACTGCTGTCAAATTGTGTTTTTGATTAAGCATGGTTTGAAACAACATCTTAAGGAGCAGTTTAACATGCCTCGTATCAGCTAACGACATTTGTGTGAACTCCACAAAAAGCAGCTGACAGTCTCGTCCATCGAGTCTGTGAAGTTGGTCTTCGTCAAATCTTCACCATGCCTCTGTCAGCAGCCGTCATCAGTGGAGTGCAGAAGTTGGTTCTGTACGAAACTAGAGCCAGGTATTTCCTTGTGGGGAGCAATCACGCCCAAACCAAACACCGTGTTCTGAAAATCGACCGCACTGAGCCCAAGGACCTGGCGATTATTGATGATAAGCATGTCTATAACCAGCAGGAGGTGAGGGAGCTCCTGGGACGTCTGGATCTGGGCAACCGCACCAAGATGGGCCAGAAGGGCTCCTCAGGTCTGTCCAGAGCTGTGTCAGCCTATGGCATCGTGGGCTTTGTCCGATTCCTTGAGGGTTATTACCTCGTGTTGATCACCAAGCGGAGGAAGATGGCCGACATTGGTGGTCACTCCATATACAAGATAGAGGATACTAACATGATCTACATCCCCAATGACTCAGTGAGGGTGACACATCCTGACGAGGCCAGATACGTGAGGATCTTTCAGAATGTGGACCTGTCCAGCAACTTCTACTTCAGCTACAGCTATGACCTGAGCCACTCCCTGCAGTACAACCTGACGCTGCTGCATAGCCCGTGTGACCCGGGCACAGTGGAGGAGGTGCACACACGGAGCAGCAGACAGCAGGACAGCTTCGACATCTTTGAGGACGAGGGCCTGCCCACACAAGTGTTCCACGGCCTCCAGAGTGAACCGTACGCCAAGTACGTGTGGAACGGCAAGCTCCTGGAGCGCGTCAAGGACACGGTGCATCCTGATTGGCTCATGTACATCATTCATGGCTTCTGTGGCCAGTCCAAGCTCCTGATCTACGGTCGTCCGGTTCATGTCACCCTCATCGCCAGGCGCTCCAGTAAATTTGCTGGCACCCGCTTCCTCAAGAGAGGAGCCAACTGCGAGGGTGACGTAGCCAATGAGGTGGAGACTGAGCAGATCATCCACGATGCGTCTGTGATGTCATTCACGGCAGGGAGTTACTCTTCGTACGTTCAGGTCAGGGGTTCTGTTCCCCTCTATTGGTCCCAGGACATCTCCACCATGATGCCTAAACCACCTATACGATTGGACCAGGCCGACCCCTATGCCCATGTAGCTGCCCTCCATTTTGACCAGATGCTCCAGCGGTTTGGCTCGCCCATCATCATCCTCAACCTCGTCAAGAAACGAGAGAAGAGAAAGCATGAGAAGATCCTCAGTGAGGAGCTCTTCCCTGCTGTAATCAACCTCAACCAGTTCCTCCCTCCAGAACACTGCATCGACTACATCGCCTGGGACATGGCCCGATACACCAagagtaaGCTGTATAACGTGCTGGACCGTCTTAGTATGATAGCAGAGAACGTGGTCAAGAGGACCGGCTTCTTCATCAACCGCTCTGACTTCTTCTGTCACACCCTCAGACCAGacgagagGTGGGGAGATCTTGGGGGAAGTCTCACCTCAAGTGGGCGTGTCCAGACAGGTGTGTTGAGGACGAACTGCGTGGACTGTCTGGACCGAACTAACACGGCCCAGTTCATGGTGGGGAAGTGTGCTCTGGCCTATCAGCTCTACGCTCTGGGCATGATTGACAAGCCCAAGCTGCAGTTTGACACGGACTGTGTTAGGCTGTTTGAGGAGCTGTATGAAGACCATGGGGACACCCTGTCTCTGCAGTACGGGGGCTCCCAGCTTGTCCACAGGGTGAAGACCTACCGGAAGATAGCCCCCTGGACACAGCACTCCAAAGACATCATGCAGACCCTGTCCCGCTACTATAGCAACGCTTTCTCAGatgCAGACCGGCAGGATGCCATCAACCTGTTTCTGCAGGTGTACCAGCCGTCAGAGTCTAAGCCTCACCTCTGGGAGCTGCCCACTGACTTCTACCTGCACCAGAGGAACTCTATGGCGTTGACTCACGACAGGCGCAGCTATACGTACTGGTGGTCAGAGGGGATCTTATCCTACCTGCCTCTGCCCTATGATGAAGTTCCCTGTGAGGAGAATATGAAgaaggtaggggtgaggagagtgaACCGTTACGACGAGAGCATTGATACCTACACAGAGTTCTTCAAACCCTACGAACTCACCTCCTTTGACGACACCTTCTGCATAGCTATGACCAACTCTGCACGgGAGTTGATGCCCAAGACGGTAGGAGTGGACCCCAGCCCCTTCACTGTGCGCAAGCCAGAGGAGACTGGGAAATCTGCTGTGATTGGtgctAAGAGCAGTAAGGAGGAGACGGTGGTCCAGAGGAAGACAGCGGCCagcgcccccccaccccccagtgaGGAACAGATCTCCAGCAGCTCAGAGGACGACTCCGAGGACGACCGCGACGATGACGGATCAGTGTCCCAACGCTCCACCCCCGTCAAACTACTAACCGAGTCTGGGGAGAGCGTCCGCACTCAGGAGGACTTCCTGCAACAGTCCATGAGAGAAACCTATGGACTCAACCTGGCCGCGCTCCCTGCCGAGGAGGACATGCTCATATATgagagGTTTGCCTATCTGGGTCAGAACCAGCACAAGTTGGAGAGAACCGAACCCTCAGTCCTGGAGAACGCCATCAACGTtgttccTGTGTCATGCTTTACGACTGACAGTATATACGAGGTGTCGTCTCCGCAGGTGGACAGGGACAACAGGGAGGTGTTTGAGGGCCACGTGCTAACTGGCCTTGGCCAGGTGAGATCACTGTGCCGAGAGGACATACTCATGTACAGAGAGTATATCAAGAACAGGTACATGTGATGTGAGAGGCTCcataaccatagaaatagaatgaatagaatggtcATCCCCATTaaagtcaatgatggcataatgggtggactggtggccattgtgagtgtacccataaggagcaaagcaggaagtaaaagcaggaagtgtgcGATCAATCTGTGATGTGATCTGTTAAGTCAACTCAACTGACATGACAAAAAAAATAGATTCCATTGTAAGAGCCACATCAGTTAGCATCATTTGAattaacattctacattaccatggaaattatTTAATCAACAGGCAGCCATTAcaagtgtacccatgagtttaccagtcataTTGCCAGGGTCAGAGATTCAaagcctgttctattcattctatttctatggccatAACCAACTCGCAACCATCGATCAACCACATCTCAACGTTGGATCAACCACGCTCTTGACCACAGCCCCATTACCTGCAAGGAGAGTGGATTGTGGTTTCATGGTATACAGTGGACTCCCAATCAAAGGCTTCTCAGGCTGATGAGATGACCGTTAGTGAATGTTTCCAGAAGAGGCAGGACAATATTCCTAGTCTGTTTTATGACTTCATATTTTTCAGTAGTTATTTTAGAGTGACAGCAGTAAAGGATGAAAACAGGTTATTTATTTCAGTTATTTTAGTCATGATCATGTATGGCTTCCAAGGTTAAACAAGTGTTTCAttgttttctttttctctctcttgccaTTTTAAACACatccctgttttttttttatgtagctTTTGAGTTTTACACACATTTAGCACAGCTGTCGTTTTTTCTGTTTGGATGTTGGACAAAATAAACGTATCATGTTTACAAAACTAA

Function

symbol description
fig4 Predicted to enable phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity. Predicted to be involved in phosphatidylinositol biosynthetic process. Predicted to act upstream of or within several processes, including negative regulation of myelination; nervous system development; and phosphatidylinositol metabolic process. Located in endosome membrane and lipid droplet. Implicated in Charcot-Marie-Tooth disease type 4J; Yunis-Varon syndrome; amyotrophic lateral sclerosis type 11; and bilateral parasagittal parieto-occipital polymicrogyria.

NR:

description
polyphosphoinositide phosphatase

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0042578 phosphoric ester hydrolase activity molecular_function

KEGG:

id description
K22913 FIG4; phosphatidylinositol 3,5-bisphosphate 5-phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036976023.1 False 3462 mRNA 0.50 21 26498514 26579166
XM_021600720.2 True 3840 mRNA 0.50 24 26498514 26603349
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110522371 gpr6 coding downstream 13799 26482588 ~ 26484715 (-)
cdc40 cdc40 coding downstream 170852 26282608 ~ 26327662 (-)
LOC110522375 LOC106607984 coding downstream 287511 26186406 ~ 26211003 (-)
LOC110522383 LOC106607997 coding downstream 1358077 25135585 ~ 25140437 (-)
epm2a epm2a coding downstream 1392959 25085911 ~ 25105555 (-)
cep57l1 cep57l1 coding upstream 77308 26680657 ~ 26685611 (-)
LOC110522364 NA coding upstream 151832 26755181 ~ 26761695 (-)
foxo3b LOC106607967 coding upstream 212335 26815684 ~ 26882852 (-)
LOC118964508 NA coding upstream 260682 26864031 ~ 26864087 (-)
afg1lb lace1 coding upstream 290865 26894214 ~ 26934927 (-)
G337735 NA non-coding downstream 8817 26489357 ~ 26489697 (-)
G337723 NA non-coding downstream 31097 26465258 ~ 26467417 (-)
G337694 NA non-coding downstream 59208 26425788 ~ 26439306 (-)
G337696 NA non-coding downstream 69209 26428519 ~ 26429305 (-)
G337525 NA non-coding downstream 319043 26125862 ~ 26179471 (-)
G337824 NA non-coding upstream 35441 26638790 ~ 26646260 (-)
G337814 NA non-coding upstream 58938 26662287 ~ 26667755 (-)
G337876 NA non-coding upstream 134179 26737528 ~ 26739425 (-)
G337897 NA non-coding upstream 168001 26771350 ~ 26794361 (-)
G337207 NA other downstream 864451 25633717 ~ 25634063 (-)
G337147 LOC106607991 other downstream 985734 25510510 ~ 25512780 (-)
G334789 NA other downstream 2474011 24018472 ~ 24024503 (-)
G334252 NA other downstream 2559145 23938272 ~ 23939369 (-)
G333842 LOC100136772 other downstream 3109944 23387061 ~ 23388570 (-)
G337894 NA other upstream 164025 26767374 ~ 26770165 (-)
LOC110522434 fkbp1b other upstream 1127059 27730407 ~ 27757242 (-)
G339008 NA other upstream 1319100 27922449 ~ 27923104 (-)
G340468 NA other upstream 2253480 28856829 ~ 28857186 (-)
LOC110522449 LOC106571559 other upstream 2641874 29168303 ~ 29300647 (-)

Expression

fig4a(fig4) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 25.
End of interactive chart.

fig4a(fig4) Expression in each Bioproject

Bar chart with 21 bars.
fig4a(fig4) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 200.
End of interactive chart.

Co-expression Network