Item | Value |
---|---|
gene id | LOC110522355 |
gene name | plekhg1 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048568.1 |
NCBI id | CM023222.3 |
chromosome length | 46841314 |
location | 27054628 ~ 27185449 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
symbol | description |
---|---|
plekhg1 | Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in regulation of small GTPase mediated signal transduction. Located in nucleoplasm. |
description |
---|
unnamed protein product |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036976025.1 | False | 7540 | mRNA | 0.50 | 17 | 27054628 | 27185449 |
XM_036976027.1 | False | 7605 | mRNA | 0.51 | 17 | 27099975 | 27185449 |
XM_036976026.1 | False | 7760 | mRNA | 0.50 | 17 | 27116411 | 27185449 |
TU381040 | True | 3014 | TUCP | 0.45 | 4 | 27176381 | 27184970 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110522356 | ostm1 | coding | upstream | 50009 | 26998492 ~ 27004619 (+) |
snx3 | snx3 | coding | upstream | 92780 | 26935835 ~ 26961848 (+) |
sesn1 | sesn1 | coding | upstream | 298084 | 26686142 ~ 26756544 (+) |
LOC110522366 | cd164 | coding | upstream | 386871 | 26651503 ~ 26667757 (+) |
ppil6 | ppil6 | coding | upstream | 412410 | 26624912 ~ 26642218 (+) |
tcp1 | tcp1 | coding | downstream | 1016 | 27186465 ~ 27195351 (+) |
LOC110522432 | otof | coding | downstream | 216648 | 27402097 ~ 27524388 (+) |
LOC118964415 | LOC106608050 | coding | downstream | 351813 | 27537262 ~ 27601564 (+) |
opn8b | LOC106608041 | coding | downstream | 439251 | 27624700 ~ 27664419 (+) |
LOC110522435 | wdcp | coding | downstream | 571984 | 27757433 ~ 27764552 (+) |
G336550 | NA | non-coding | upstream | 8935 | 27044702 ~ 27045693 (+) |
G336519 | NA | non-coding | upstream | 76229 | 26978187 ~ 26978399 (+) |
G336464 | NA | non-coding | upstream | 159791 | 26892229 ~ 26894837 (+) |
G336466 | NA | non-coding | upstream | 165445 | 26888641 ~ 26889183 (+) |
G336463 | NA | non-coding | upstream | 169290 | 26885134 ~ 26885338 (+) |
G336650 | wtap | non-coding | downstream | 21380 | 27206829 ~ 27213254 (+) |
G336705 | NA | non-coding | downstream | 111097 | 27296546 ~ 27298077 (+) |
G336709 | fndc1 | non-coding | downstream | 117223 | 27302672 ~ 27305939 (+) |
G336723 | NA | non-coding | downstream | 142430 | 27327879 ~ 27371054 (+) |
G336724 | NA | non-coding | downstream | 148675 | 27334124 ~ 27340999 (+) |
LOC110522376 | sash1 | other | upstream | 996937 | 25761890 ~ 26057813 (+) |
G334473 | armt1 | other | upstream | 2631897 | 24420114 ~ 24422731 (+) |
G334475 | NA | other | upstream | 2635682 | 24417582 ~ 24418946 (+) |
si:ch211-51e12.7 | NA | other | upstream | 2984952 | 24063831 ~ 24072963 (+) |
G339660 | NA | other | downstream | 1673267 | 28858716 ~ 28859155 (+) |
G339693 | NA | other | downstream | 1729150 | 28914599 ~ 28915539 (+) |
G339830 | LOC100846954 | other | downstream | 1981069 | 29166518 ~ 29166996 (+) |
G339928 | NA | other | downstream | 2149920 | 29335369 ~ 29336939 (+) |