LOC110522435 (wdcp)


Basic Information

Item Value
gene id LOC110522435
gene name wdcp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048568.1
NCBI id CM023222.3
chromosome length 46841314
location 27757433 ~ 27764552 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021600819.2
CCTTGAAAAGTGAAATCAACTTGGGAAATGTGATCAAGGTTTATGGTTTGACAAGACAATCGAGGCATGTAATGACACGTTTGTGCATATAATTTCGTGACTAAAGAACGTATTCGCCATATAGCTACTTCACTGATGGATTTAGCTAAcatgtagctaacgttagctacatgTGTTATAAGCTGGCCAGACCCCAAAAATGACAGCTACTGTAGATAGCTATCCAGTAACTGTCAGTATGGAACTGGGCAAAGCCAAGTTGCTGAGGTCAGGTCTGAACACGCTACACCAAACCATCCACCCCGTCCACGGGATAGCCTGGACTGACGGGAAGCAGGTCtgcctcacctccctctactatGACAACTGCGAAGTCAAATTCGGCGACACCAACGTCATCGGTCAATTTGAGCATGTCTTCGGCCTCTCCTGGGGCCCTCTGTGCTGTTCCGGCGCTCCTGCCCTGTTGGCCGTCCAACACAAGAAACATGTCACAGTGTGGCAGCTGCAGCTCAGCGCTCTGGAACAGAACAAGCTGCTCTGCACTCAGACCTGTGAGATGAGCGAACCGTTCCCCCTTCTGTCTGAGGGATGTGTCTGGCATCCCAAGATGGACATCCTTTCTGTCCTCACTAAGAAAGATGCCTCTGTGCTGTTCTGTGTCCGTGTGGACAACCGTAGGGTCAAGGCTGATATTAAAGGCAGTGGACTCATCCACTGTGCCTGCTGGACCAAAGATGGCACCCGGTTGGTTTTGGCTATAGGAAGCGCCCTTCACTCCTACATCTATAACGATGTTCAGAAGAGTCTTTTAGCCTGCTCCTTCTGCCCCATCTTTGACGTGGGCGGGTACATCTGTGCCATCGAGTCAACAGGCGAGGCCCAGGTGGCAGTAGCTACAGAGCTGCCTCTGGATAGGATCTGCGGGCTGAACGCTGGCATAGCATTTGACGTGTCCTCAGATTCAGAGTCCTCCCTACCTGGACATTCTTCTCCTATGGTGATGTTGGACGAGGATGGCTGTATAGACCCACGCAGGAGGTCCTTTGACTCTGAGAGGTCCTACCTCTCCTGCTCTGCCTCCGGCGGTCCTATGGACCTCACCCACCTCCTGGCCAAGCACCGGCGCTCAGACCCTAGTCCACTCTTACACCTGCGCCGCAGGGACCACCTGACTGGCTCTGGACAGGATTCGTCACACCTTATCCTGGTAACCTACGAACGGAAAGTCACCAGCACCAGTAAGGTCAGCATCCCTGGGATTCTGGTGCCAGACATTGTGGCCTTTGACTCCAGAGGTTCCACGGTGGCTGTGGCCTCCAACACATGTAGCATGGTACTGGTCTACTGCATCACGCCGTCCACCATGCCCAACATCCAGCAGATCTCCTTACAGAAAAACGAGAGGCCCAAAGGCATCTGCTTTCTTGGTGACAAGATGTTGCTTCTCATGATTGGCAGACAGAAGTCCAAAGACCctgccttcctcccctcctccaatACGGACAAATACATCCTGCGCCTCGCATCCAAGGAGATTGTCTACAACGGAGGAACCCCGGCGTGTCCCTCCCCGAATCGAGAATCCCCCGTTAGACGCCACTCGAAGCATGTCTTCTCTAAAGATGAGCAGCAGGAGCTTGTTGAGATTAAGGAGCTGGTGCTGCCGGGAGGAGGTGTAATCCAGTCCCATTCTCCagggagcagcaggaggaggctGGTGGAGGAGGTGAGAAGCCCGGAGCCCAGCTCAGTCACCAGCTCAGTGGACTTCTCCTACTCTGACCTCTGTCACACCTCTGACCAACCTCACTCTAACGCTTCCTCCATTACGGTCGAAAACTTTGACACGGAACCCGTCAACCGAATGACGATGCTCTCCATGGCAGGACAGGCTAGCAGGGAGTCAAGTCAAACCTGCTCCCCATACTACAACCCTAGGGATAAGCCCCACACGGAGCTCCCCACCCTGCCCAAAACCACCCCCTTGGCccccagagagaaggagaggaaccTGGAGCAGCTGTCTCAGAACATGGAGAGGATTTTCTCTCGTTTTTCTGAGGTGCAACAGTGTCTGACAGAGATCAGGGACTTCACCCGGAACGGCAAAAAGGGTCTGGGGACTAGTTACCCCAATGCCTGTGATCCTCCATACGTTAACATCACATGTCAGAAGCAGCTGTCTGAGAATGTGTTTATAGATGAGAGAAGGCCAGTGTTGTTGTGTGAGGGGAAGCTGTGTCTGAAGGTTCTTCAGGAGCTCTTCAACGTCACTATAGTAGAGATGGTGTATGGTCCGTTGTGGATAGTCCTGGTAGCGGATGCAGAGGGCTTTGTACCCCTGACTTTTAAACCCAAAGAGGAGTTGACGGTGAGGAACGGAAAGAGGAAATCTCCCATCAGAACCCCTGGCAGCCCAGACTCCTGCCCCTCCAGCCCAGTCAAATCTCCCTCCAGCCCAGTCAAATCTCCCTCCAGCCCAGTCAATTCTTACCCCAACACAGAGACTTGAACACAGCATAAATCTCAAAACAGACTTCAGCATAGTGGGAGAGAGCACACAGCATGGGACTACCGCCTAGCATAACATATGAGATGTCAATGCTTTATGCATGCATATCTAAAAACTGCACACGCAAAGACTCAACCCCTCGGCAGCTTTTTATGAACAATCAGTACTGGGtggcaaatgttcctttttcagTTGGGGGATTATTCAATACACTTTTGAAAGAAGCACCTTTCAAACAGAATGTTTACATTTAGTGACTTTGGGAGATGATATTTTTGGGGGCTTTGTATTATATGCCCATCTGGTTCAAGAGGAAGTTCTGTTTTTTTAATCAGAGCACTGAGGTAAGATAGTGTGGTGTTTTGGCTGGCAGAGTTCAGTGTAGCTGCAACCAAATCCCAAAGAGATGTATCCTGTTTGTATGTTATACGATTGTATATTATTAAAACGTTCAAATGTTTAAAATGGATATTTTCATCACTCA

Function

symbol description
wdcp Predicted to enable kinase binding activity. Orthologous to human WDCP (WD repeat and coiled coil containing).

NR:

description
WD repeat and coiled-coil-containing protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021600819.2 True 2999 mRNA 0.51 4 27757433 27764552

Neighbor

gene id symbol gene type direction distance location
opn8b LOC106608041 coding upstream 93014 27624700 ~ 27664419 (+)
LOC118964415 LOC106608050 coding upstream 155869 27537262 ~ 27601564 (+)
LOC110522432 otof coding upstream 233045 27402097 ~ 27524388 (+)
tcp1 tcp1 coding upstream 562082 27186465 ~ 27195351 (+)
LOC110522355 plekhg1 coding upstream 571984 27054628 ~ 27185449 (+)
LOC110522440 atad2b coding downstream 36371 27800923 ~ 27962367 (+)
LOC118964460 NA coding downstream 106591 27871143 ~ 27872978 (+)
LOC110522445 LOC106608054 coding downstream 793648 28558200 ~ 28567300 (+)
LOC110522446 bmp2 coding downstream 865452 28630004 ~ 28636513 (+)
LOC110521072 plcb1 coding downstream 934515 28699067 ~ 28934753 (+)
G338468 NA non-coding upstream 25751 27730411 ~ 27731682 (+)
G338448 NA non-coding upstream 48352 27706120 ~ 27709081 (+)
G338426 NA non-coding upstream 75983 27681207 ~ 27681450 (+)
G338376 NA non-coding upstream 91582 27665463 ~ 27665851 (+)
G338506 ubxn2a non-coding downstream 33590 27798142 ~ 27799207 (+)
G338514 NA non-coding downstream 49239 27813791 ~ 27814069 (+)
G338515 NA non-coding downstream 59916 27824468 ~ 27824690 (+)
G338517 NA non-coding downstream 68172 27832724 ~ 27832954 (+)
G338524 NA non-coding downstream 81570 27846122 ~ 27846425 (+)
G336464 NA other upstream 862596 26892229 ~ 26894837 (+)
LOC110522376 sash1 other upstream 1699742 25761890 ~ 26057813 (+)
G334473 armt1 other upstream 3334702 24420114 ~ 24422731 (+)
G339660 NA other downstream 1094164 28858716 ~ 28859155 (+)
G339693 NA other downstream 1150047 28914599 ~ 28915539 (+)
G339830 LOC100846954 other downstream 1401966 29166518 ~ 29166996 (+)
G339928 NA other downstream 1570817 29335369 ~ 29336939 (+)
G342538 NA other downstream 3617274 31381826 ~ 31382749 (+)

Expression


Co-expression Network